Gene : Araha.13526s0004 A. halleri v1.1
Defline:  (1 of 2) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase Genomic Order:  4
Name:  ? Araha.13526s0004 Secondary Identifier:  ? PAC:28839844
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CITRULBIO-PWY Arabidopsis halleri pathologic  
Ahalleri GLUTAMINDEG-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3282 Arabidopsis halleri pathologic  
Ahalleri PWY-4341 Arabidopsis halleri pathologic  
Ahalleri PWY-6549 Arabidopsis halleri pathologic  
Ahalleri PWY-6964 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.13526s0004 0.5kb upstream 0.5kb upstream 11753 true Scaffold13526: 8107-19859 Arabidopsis halleri
Araha.13526s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold13526: 8107-8606 Arabidopsis halleri
Araha.13526s0004 0.5kb downstream 0.5kb downstream 11753 true Scaffold13526: 8607-20359 Arabidopsis halleri
Araha.13526s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold13526: 19860-20359 Arabidopsis halleri
Araha.13526s0004 1.0kb upstream 1.0kb upstream 12253 true Scaffold13526: 7607-19859 Arabidopsis halleri
Araha.13526s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold13526: 7607-8606 Arabidopsis halleri
Araha.13526s0004 1.0kb downstream 1.0kb downstream 12253 true Scaffold13526: 8607-20859 Arabidopsis halleri
Araha.13526s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold13526: 19860-20859 Arabidopsis halleri
Araha.13526s0004 2.0kb upstream 2.0kb upstream 13253 true Scaffold13526: 6607-19859 Arabidopsis halleri
Araha.13526s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold13526: 6607-8606 Arabidopsis halleri
Araha.13526s0004 2.0kb downstream 2.0kb downstream 13253 true Scaffold13526: 8607-21859 Arabidopsis halleri
Araha.13526s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold13526: 19860-21859 Arabidopsis halleri
Araha.13526s0004 5.0kb upstream 5.0kb upstream 16253 true Scaffold13526: 3607-19859 Arabidopsis halleri
Araha.13526s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold13526: 3607-8606 Arabidopsis halleri
Araha.13526s0004 5.0kb downstream 5.0kb downstream 16253 true Scaffold13526: 8607-24859 Arabidopsis halleri
Araha.13526s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold13526: 19860-24859 Arabidopsis halleri
Araha.13526s0004 10.0kb upstream 10.0kb upstream 19859 true Scaffold13526: 1-19859 Arabidopsis halleri
Araha.13526s0004 10.0kb upstream 10.0kb upstream 8606 false Scaffold13526: 1-8606 Arabidopsis halleri
Araha.13526s0004 10.0kb downstream 10.0kb downstream 21253 true Scaffold13526: 8607-29859 Arabidopsis halleri
Araha.13526s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold13526: 19860-29859 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511077 5273 Angiosperm View MSA
122371936 5261 Brassicaceae View MSA
123800262 5264 Brassicales-Malvales View MSA
124297698 5266 SBM View MSA
124149522 5268 Malvidae View MSA
123875316 5270 Rosid View MSA
123459159 5271 Pentapetalae View MSA
122494554 5272 Eudicot View MSA
120784144 5274 Embryophyte View MSA
122826079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain