Gene : Araha.6742s0002 A. halleri v1.1

Defline:  (1 of 2) PTHR23075:SF0 - ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  2
Name:  ? Araha.6742s0002 Secondary Identifier:  ? PAC:28848161

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6742s0002 0.5kb upstream 0.5kb upstream 3861 true Scaffold6742: 2537-6397 Arabidopsis halleri
Araha.6742s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6742: 5898-6397 Arabidopsis halleri
Araha.6742s0002 0.5kb downstream 0.5kb downstream 3861 true Scaffold6742: 2037-5897 Arabidopsis halleri
Araha.6742s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6742: 2037-2536 Arabidopsis halleri
Araha.6742s0002 1.0kb upstream 1.0kb upstream 4361 true Scaffold6742: 2537-6897 Arabidopsis halleri
Araha.6742s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6742: 5898-6897 Arabidopsis halleri
Araha.6742s0002 1.0kb downstream 1.0kb downstream 4361 true Scaffold6742: 1537-5897 Arabidopsis halleri
Araha.6742s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6742: 1537-2536 Arabidopsis halleri
Araha.6742s0002 2.0kb upstream 2.0kb upstream 5361 true Scaffold6742: 2537-7897 Arabidopsis halleri
Araha.6742s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6742: 5898-7897 Arabidopsis halleri
Araha.6742s0002 2.0kb downstream 2.0kb downstream 5361 true Scaffold6742: 537-5897 Arabidopsis halleri
Araha.6742s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6742: 537-2536 Arabidopsis halleri
Araha.6742s0002 5.0kb upstream 5.0kb upstream 8361 true Scaffold6742: 2537-10897 Arabidopsis halleri
Araha.6742s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6742: 5898-10897 Arabidopsis halleri
Araha.6742s0002 5.0kb downstream 5.0kb downstream 5897 true Scaffold6742: 1-5897 Arabidopsis halleri
Araha.6742s0002 5.0kb downstream 5.0kb downstream 2536 false Scaffold6742: 1-2536 Arabidopsis halleri
Araha.6742s0002 10.0kb upstream 10.0kb upstream 13361 true Scaffold6742: 2537-15897 Arabidopsis halleri
Araha.6742s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold6742: 5898-15897 Arabidopsis halleri
Araha.6742s0002 10.0kb downstream 10.0kb downstream 5897 true Scaffold6742: 1-5897 Arabidopsis halleri
Araha.6742s0002 10.0kb downstream 10.0kb downstream 2536 false Scaffold6742: 1-2536 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365045 5261 Brassicaceae View MSA
123836696 5264 Brassicales-Malvales View MSA
124336969 5266 SBM View MSA
124240183 5268 Malvidae View MSA
124062064 5270 Rosid View MSA
123743451 5271 Pentapetalae View MSA
122787141 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain