Gene : Araha.14819s0009 A. halleri v1.1
Defline:  (1 of 7) PTHR11254 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Genomic Order:  9
Name:  ? Araha.14819s0009 Secondary Identifier:  ? PAC:28852402
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.14819s0009 0.5kb upstream 0.5kb upstream 6453 true Scaffold14819: 22855-29307 Arabidopsis halleri
Araha.14819s0009 0.5kb upstream 0.5kb upstream 126 false Scaffold14819: 29182-29307 Arabidopsis halleri
Araha.14819s0009 0.5kb downstream 0.5kb downstream 6827 true Scaffold14819: 22355-29181 Arabidopsis halleri
Araha.14819s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold14819: 22355-22854 Arabidopsis halleri
Araha.14819s0009 1.0kb upstream 1.0kb upstream 6453 true Scaffold14819: 22855-29307 Arabidopsis halleri
Araha.14819s0009 1.0kb upstream 1.0kb upstream 126 false Scaffold14819: 29182-29307 Arabidopsis halleri
Araha.14819s0009 1.0kb downstream 1.0kb downstream 7327 true Scaffold14819: 21855-29181 Arabidopsis halleri
Araha.14819s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold14819: 21855-22854 Arabidopsis halleri
Araha.14819s0009 2.0kb upstream 2.0kb upstream 6453 true Scaffold14819: 22855-29307 Arabidopsis halleri
Araha.14819s0009 2.0kb upstream 2.0kb upstream 126 false Scaffold14819: 29182-29307 Arabidopsis halleri
Araha.14819s0009 2.0kb downstream 2.0kb downstream 8327 true Scaffold14819: 20855-29181 Arabidopsis halleri
Araha.14819s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold14819: 20855-22854 Arabidopsis halleri
Araha.14819s0009 5.0kb upstream 5.0kb upstream 6453 true Scaffold14819: 22855-29307 Arabidopsis halleri
Araha.14819s0009 5.0kb upstream 5.0kb upstream 126 false Scaffold14819: 29182-29307 Arabidopsis halleri
Araha.14819s0009 5.0kb downstream 5.0kb downstream 11327 true Scaffold14819: 17855-29181 Arabidopsis halleri
Araha.14819s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold14819: 17855-22854 Arabidopsis halleri
Araha.14819s0009 10.0kb upstream 10.0kb upstream 6453 true Scaffold14819: 22855-29307 Arabidopsis halleri
Araha.14819s0009 10.0kb upstream 10.0kb upstream 126 false Scaffold14819: 29182-29307 Arabidopsis halleri
Araha.14819s0009 10.0kb downstream 10.0kb downstream 16327 true Scaffold14819: 12855-29181 Arabidopsis halleri
Araha.14819s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold14819: 12855-22854 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367039 5261 Brassicaceae View MSA
123827587 5264 Brassicales-Malvales View MSA
124346572 5266 SBM View MSA
124252639 5268 Malvidae View MSA
124065760 5270 Rosid View MSA
123737097 5271 Pentapetalae View MSA
122793139 5272 Eudicot View MSA
122047566 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121351552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain