Gene : Araha.15174s0003 A. halleri v1.1

Defline:  (1 of 3) PTHR11941//PTHR11941:SF81 - ENOYL-COA HYDRATASE-RELATED Genomic Order:  3
Name:  ? Araha.15174s0003 Secondary Identifier:  ? PAC:28842971

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7574 Arabidopsis halleri pathologic  
Ahalleri VALDEG-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.15174s0003 0.5kb upstream 0.5kb upstream 3451 true Scaffold15174: 9420-12870 Arabidopsis halleri
Araha.15174s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold15174: 12371-12870 Arabidopsis halleri
Araha.15174s0003 0.5kb downstream 0.5kb downstream 3451 true Scaffold15174: 8920-12370 Arabidopsis halleri
Araha.15174s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold15174: 8920-9419 Arabidopsis halleri
Araha.15174s0003 1.0kb upstream 1.0kb upstream 3951 true Scaffold15174: 9420-13370 Arabidopsis halleri
Araha.15174s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold15174: 12371-13370 Arabidopsis halleri
Araha.15174s0003 1.0kb downstream 1.0kb downstream 3951 true Scaffold15174: 8420-12370 Arabidopsis halleri
Araha.15174s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold15174: 8420-9419 Arabidopsis halleri
Araha.15174s0003 2.0kb upstream 2.0kb upstream 4951 true Scaffold15174: 9420-14370 Arabidopsis halleri
Araha.15174s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold15174: 12371-14370 Arabidopsis halleri
Araha.15174s0003 2.0kb downstream 2.0kb downstream 4951 true Scaffold15174: 7420-12370 Arabidopsis halleri
Araha.15174s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold15174: 7420-9419 Arabidopsis halleri
Araha.15174s0003 5.0kb upstream 5.0kb upstream 7951 true Scaffold15174: 9420-17370 Arabidopsis halleri
Araha.15174s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold15174: 12371-17370 Arabidopsis halleri
Araha.15174s0003 5.0kb downstream 5.0kb downstream 7951 true Scaffold15174: 4420-12370 Arabidopsis halleri
Araha.15174s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold15174: 4420-9419 Arabidopsis halleri
Araha.15174s0003 10.0kb upstream 10.0kb upstream 12951 true Scaffold15174: 9420-22370 Arabidopsis halleri
Araha.15174s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold15174: 12371-22370 Arabidopsis halleri
Araha.15174s0003 10.0kb downstream 10.0kb downstream 12370 true Scaffold15174: 1-12370 Arabidopsis halleri
Araha.15174s0003 10.0kb downstream 10.0kb downstream 9419 false Scaffold15174: 1-9419 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369641 5261 Brassicaceae View MSA
123838723 5264 Brassicales-Malvales View MSA
124343848 5266 SBM View MSA
124242681 5268 Malvidae View MSA
124073878 5270 Rosid View MSA
123743362 5271 Pentapetalae View MSA
122792177 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain