Gene : Araha.15082s0003 A. halleri v1.1
Defline:  (1 of 2) PTHR11680:SF7 - SERINE HYDROXYMETHYLTRANSFERASE 6-RELATED Genomic Order:  3
Name:  ? Araha.15082s0003 Secondary Identifier:  ? PAC:28850981
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-2161 Arabidopsis halleri pathologic  
Ahalleri PWY-3841 Arabidopsis halleri pathologic  
Ahalleri SER-GLYSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.15082s0003 0.5kb upstream 0.5kb upstream 2584 true Scaffold15082: 4588-7171 Arabidopsis halleri
Araha.15082s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold15082: 4588-5087 Arabidopsis halleri
Araha.15082s0003 0.5kb downstream 0.5kb downstream 2085 true Scaffold15082: 5088-7172 Arabidopsis halleri
Araha.15082s0003 0.5kb downstream 0.5kb downstream 1 false Scaffold15082: 7172-7172 Arabidopsis halleri
Araha.15082s0003 1.0kb upstream 1.0kb upstream 3084 true Scaffold15082: 4088-7171 Arabidopsis halleri
Araha.15082s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold15082: 4088-5087 Arabidopsis halleri
Araha.15082s0003 1.0kb downstream 1.0kb downstream 2085 true Scaffold15082: 5088-7172 Arabidopsis halleri
Araha.15082s0003 1.0kb downstream 1.0kb downstream 1 false Scaffold15082: 7172-7172 Arabidopsis halleri
Araha.15082s0003 2.0kb upstream 2.0kb upstream 4084 true Scaffold15082: 3088-7171 Arabidopsis halleri
Araha.15082s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold15082: 3088-5087 Arabidopsis halleri
Araha.15082s0003 2.0kb downstream 2.0kb downstream 2085 true Scaffold15082: 5088-7172 Arabidopsis halleri
Araha.15082s0003 2.0kb downstream 2.0kb downstream 1 false Scaffold15082: 7172-7172 Arabidopsis halleri
Araha.15082s0003 5.0kb upstream 5.0kb upstream 7084 true Scaffold15082: 88-7171 Arabidopsis halleri
Araha.15082s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold15082: 88-5087 Arabidopsis halleri
Araha.15082s0003 5.0kb downstream 5.0kb downstream 2085 true Scaffold15082: 5088-7172 Arabidopsis halleri
Araha.15082s0003 5.0kb downstream 5.0kb downstream 1 false Scaffold15082: 7172-7172 Arabidopsis halleri
Araha.15082s0003 10.0kb upstream 10.0kb upstream 7171 true Scaffold15082: 1-7171 Arabidopsis halleri
Araha.15082s0003 10.0kb upstream 10.0kb upstream 5087 false Scaffold15082: 1-5087 Arabidopsis halleri
Araha.15082s0003 10.0kb downstream 10.0kb downstream 2085 true Scaffold15082: 5088-7172 Arabidopsis halleri
Araha.15082s0003 10.0kb downstream 10.0kb downstream 1 false Scaffold15082: 7172-7172 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374952 5261 Brassicaceae View MSA
123838669 5264 Brassicales-Malvales View MSA
124343045 5266 SBM View MSA
124253011 5268 Malvidae View MSA
124069560 5270 Rosid View MSA
123741866 5271 Pentapetalae View MSA
122787051 5272 Eudicot View MSA
122046261 5273 Angiosperm View MSA
121345900 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain