Gene : Araha.14430s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR31561:SF2 - 3-KETOACYL-COA SYNTHASE 10 Genomic Order:  1
Name:  ? Araha.14430s0001 Secondary Identifier:  ? PAC:28854402

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5080 Arabidopsis halleri pathologic  
Ahalleri PWY-6433 Arabidopsis halleri pathologic  
Ahalleri PWY-6598 Arabidopsis halleri pathologic  
Ahalleri PWY-7036 Arabidopsis halleri pathologic  
Ahalleri PWY-7601 Arabidopsis halleri pathologic  
Ahalleri PWY-7619 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.14430s0001 0.5kb upstream 0.5kb upstream 2220 true Scaffold14430: 2-2221 Arabidopsis halleri
Araha.14430s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold14430: 1722-2221 Arabidopsis halleri
Araha.14430s0001 0.5kb downstream 0.5kb downstream 1721 true Scaffold14430: 1-1721 Arabidopsis halleri
Araha.14430s0001 0.5kb downstream 0.5kb downstream 1 false Scaffold14430: 1-1 Arabidopsis halleri
Araha.14430s0001 1.0kb upstream 1.0kb upstream 2280 true Scaffold14430: 2-2281 Arabidopsis halleri
Araha.14430s0001 1.0kb upstream 1.0kb upstream 560 false Scaffold14430: 1722-2281 Arabidopsis halleri
Araha.14430s0001 1.0kb downstream 1.0kb downstream 1721 true Scaffold14430: 1-1721 Arabidopsis halleri
Araha.14430s0001 1.0kb downstream 1.0kb downstream 1 false Scaffold14430: 1-1 Arabidopsis halleri
Araha.14430s0001 2.0kb upstream 2.0kb upstream 2280 true Scaffold14430: 2-2281 Arabidopsis halleri
Araha.14430s0001 2.0kb upstream 2.0kb upstream 560 false Scaffold14430: 1722-2281 Arabidopsis halleri
Araha.14430s0001 2.0kb downstream 2.0kb downstream 1721 true Scaffold14430: 1-1721 Arabidopsis halleri
Araha.14430s0001 2.0kb downstream 2.0kb downstream 1 false Scaffold14430: 1-1 Arabidopsis halleri
Araha.14430s0001 5.0kb upstream 5.0kb upstream 2280 true Scaffold14430: 2-2281 Arabidopsis halleri
Araha.14430s0001 5.0kb upstream 5.0kb upstream 560 false Scaffold14430: 1722-2281 Arabidopsis halleri
Araha.14430s0001 5.0kb downstream 5.0kb downstream 1721 true Scaffold14430: 1-1721 Arabidopsis halleri
Araha.14430s0001 5.0kb downstream 5.0kb downstream 1 false Scaffold14430: 1-1 Arabidopsis halleri
Araha.14430s0001 10.0kb upstream 10.0kb upstream 2280 true Scaffold14430: 2-2281 Arabidopsis halleri
Araha.14430s0001 10.0kb upstream 10.0kb upstream 560 false Scaffold14430: 1722-2281 Arabidopsis halleri
Araha.14430s0001 10.0kb downstream 10.0kb downstream 1721 true Scaffold14430: 1-1721 Arabidopsis halleri
Araha.14430s0001 10.0kb downstream 10.0kb downstream 1 false Scaffold14430: 1-1 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365559 5261 Brassicaceae View MSA
123833929 5264 Brassicales-Malvales View MSA
124344788 5266 SBM View MSA
124251838 5268 Malvidae View MSA
124063374 5270 Rosid View MSA
123749222 5271 Pentapetalae View MSA
122793807 5272 Eudicot View MSA
122045773 5273 Angiosperm View MSA
121310500 5274 Embryophyte View MSA
123347968 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain