Gene : Araha.15651s0003 A. halleri v1.1
Defline:  (1 of 1) PF00575//PF03876 - S1 RNA binding domain (S1) // SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 (SHS2_Rpb7-N) Genomic Order:  3
Name:  ? Araha.15651s0003 Secondary Identifier:  ? PAC:28863126
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.15651s0003 0.5kb upstream 0.5kb upstream 2311 true Scaffold15651: 6881-9191 Arabidopsis halleri
Araha.15651s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold15651: 6881-7380 Arabidopsis halleri
Araha.15651s0003 0.5kb downstream 0.5kb downstream 2311 true Scaffold15651: 7381-9691 Arabidopsis halleri
Araha.15651s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold15651: 9192-9691 Arabidopsis halleri
Araha.15651s0003 1.0kb upstream 1.0kb upstream 2811 true Scaffold15651: 6381-9191 Arabidopsis halleri
Araha.15651s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold15651: 6381-7380 Arabidopsis halleri
Araha.15651s0003 1.0kb downstream 1.0kb downstream 2811 true Scaffold15651: 7381-10191 Arabidopsis halleri
Araha.15651s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold15651: 9192-10191 Arabidopsis halleri
Araha.15651s0003 2.0kb upstream 2.0kb upstream 3811 true Scaffold15651: 5381-9191 Arabidopsis halleri
Araha.15651s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold15651: 5381-7380 Arabidopsis halleri
Araha.15651s0003 2.0kb downstream 2.0kb downstream 3811 true Scaffold15651: 7381-11191 Arabidopsis halleri
Araha.15651s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold15651: 9192-11191 Arabidopsis halleri
Araha.15651s0003 5.0kb upstream 5.0kb upstream 6811 true Scaffold15651: 2381-9191 Arabidopsis halleri
Araha.15651s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold15651: 2381-7380 Arabidopsis halleri
Araha.15651s0003 5.0kb downstream 5.0kb downstream 6811 true Scaffold15651: 7381-14191 Arabidopsis halleri
Araha.15651s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold15651: 9192-14191 Arabidopsis halleri
Araha.15651s0003 10.0kb upstream 10.0kb upstream 9191 true Scaffold15651: 1-9191 Arabidopsis halleri
Araha.15651s0003 10.0kb upstream 10.0kb upstream 7380 false Scaffold15651: 1-7380 Arabidopsis halleri
Araha.15651s0003 10.0kb downstream 10.0kb downstream 11811 true Scaffold15651: 7381-19191 Arabidopsis halleri
Araha.15651s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold15651: 9192-19191 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375120 5261 Brassicaceae View MSA
123829560 5264 Brassicales-Malvales View MSA
124341340 5266 SBM View MSA
124239705 5268 Malvidae View MSA
124066331 5270 Rosid View MSA
123736511 5271 Pentapetalae View MSA
122789999 5272 Eudicot View MSA
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain