Gene : Araha.6997s0004 A. halleri v1.1

Defline:  (1 of 2) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Genomic Order:  4
Name:  ? Araha.6997s0004 Secondary Identifier:  ? PAC:28854905

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6997s0004 0.5kb upstream 0.5kb upstream 2821 true Scaffold6997: 12817-15637 Arabidopsis halleri
Araha.6997s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6997: 15138-15637 Arabidopsis halleri
Araha.6997s0004 0.5kb downstream 0.5kb downstream 2821 true Scaffold6997: 12317-15137 Arabidopsis halleri
Araha.6997s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6997: 12317-12816 Arabidopsis halleri
Araha.6997s0004 1.0kb upstream 1.0kb upstream 3321 true Scaffold6997: 12817-16137 Arabidopsis halleri
Araha.6997s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6997: 15138-16137 Arabidopsis halleri
Araha.6997s0004 1.0kb downstream 1.0kb downstream 3321 true Scaffold6997: 11817-15137 Arabidopsis halleri
Araha.6997s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6997: 11817-12816 Arabidopsis halleri
Araha.6997s0004 2.0kb upstream 2.0kb upstream 4321 true Scaffold6997: 12817-17137 Arabidopsis halleri
Araha.6997s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6997: 15138-17137 Arabidopsis halleri
Araha.6997s0004 2.0kb downstream 2.0kb downstream 4321 true Scaffold6997: 10817-15137 Arabidopsis halleri
Araha.6997s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6997: 10817-12816 Arabidopsis halleri
Araha.6997s0004 5.0kb upstream 5.0kb upstream 7321 true Scaffold6997: 12817-20137 Arabidopsis halleri
Araha.6997s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold6997: 15138-20137 Arabidopsis halleri
Araha.6997s0004 5.0kb downstream 5.0kb downstream 7321 true Scaffold6997: 7817-15137 Arabidopsis halleri
Araha.6997s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6997: 7817-12816 Arabidopsis halleri
Araha.6997s0004 10.0kb upstream 10.0kb upstream 12321 true Scaffold6997: 12817-25137 Arabidopsis halleri
Araha.6997s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold6997: 15138-25137 Arabidopsis halleri
Araha.6997s0004 10.0kb downstream 10.0kb downstream 12321 true Scaffold6997: 2817-15137 Arabidopsis halleri
Araha.6997s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold6997: 2817-12816 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327524 5261 Brassicaceae View MSA
123768947 5264 Brassicales-Malvales View MSA
124267524 5266 SBM View MSA
124244133 5268 Malvidae View MSA
124065937 5270 Rosid View MSA
123742102 5271 Pentapetalae View MSA
122796533 5272 Eudicot View MSA
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain