Gene : Araha.15719s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR31846:SF12 - RNA-BINDING PROTEIN YHBY Genomic Order:  3
Name:  ? Araha.15719s0003 Secondary Identifier:  ? PAC:28853439

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.15719s0003 0.5kb upstream 0.5kb upstream 5041 true Scaffold15719: 4926-9966 Arabidopsis halleri
Araha.15719s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold15719: 4926-5425 Arabidopsis halleri
Araha.15719s0003 0.5kb downstream 0.5kb downstream 5041 true Scaffold15719: 5426-10466 Arabidopsis halleri
Araha.15719s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold15719: 9967-10466 Arabidopsis halleri
Araha.15719s0003 1.0kb upstream 1.0kb upstream 5541 true Scaffold15719: 4426-9966 Arabidopsis halleri
Araha.15719s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold15719: 4426-5425 Arabidopsis halleri
Araha.15719s0003 1.0kb downstream 1.0kb downstream 5541 true Scaffold15719: 5426-10966 Arabidopsis halleri
Araha.15719s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold15719: 9967-10966 Arabidopsis halleri
Araha.15719s0003 2.0kb upstream 2.0kb upstream 6541 true Scaffold15719: 3426-9966 Arabidopsis halleri
Araha.15719s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold15719: 3426-5425 Arabidopsis halleri
Araha.15719s0003 2.0kb downstream 2.0kb downstream 6541 true Scaffold15719: 5426-11966 Arabidopsis halleri
Araha.15719s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold15719: 9967-11966 Arabidopsis halleri
Araha.15719s0003 5.0kb upstream 5.0kb upstream 9541 true Scaffold15719: 426-9966 Arabidopsis halleri
Araha.15719s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold15719: 426-5425 Arabidopsis halleri
Araha.15719s0003 5.0kb downstream 5.0kb downstream 9541 true Scaffold15719: 5426-14966 Arabidopsis halleri
Araha.15719s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold15719: 9967-14966 Arabidopsis halleri
Araha.15719s0003 10.0kb upstream 10.0kb upstream 9966 true Scaffold15719: 1-9966 Arabidopsis halleri
Araha.15719s0003 10.0kb upstream 10.0kb upstream 5425 false Scaffold15719: 1-5425 Arabidopsis halleri
Araha.15719s0003 10.0kb downstream 10.0kb downstream 14541 true Scaffold15719: 5426-19966 Arabidopsis halleri
Araha.15719s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold15719: 9967-19966 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366722 5261 Brassicaceae View MSA
123833779 5264 Brassicales-Malvales View MSA
124342700 5266 SBM View MSA
124243274 5268 Malvidae View MSA
124067108 5270 Rosid View MSA
123736632 5271 Pentapetalae View MSA
122792213 5272 Eudicot View MSA
122044793 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain