Gene : Araha.15442s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR12608:SF6 - GDT1-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  1
Name:  ? Araha.15442s0001 Secondary Identifier:  ? PAC:28852001

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.15442s0001 0.5kb upstream 0.5kb upstream 4086 true Scaffold15442: 47-4132 Arabidopsis halleri
Araha.15442s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold15442: 3633-4132 Arabidopsis halleri
Araha.15442s0001 0.5kb downstream 0.5kb downstream 3632 true Scaffold15442: 1-3632 Arabidopsis halleri
Araha.15442s0001 0.5kb downstream 0.5kb downstream 46 false Scaffold15442: 1-46 Arabidopsis halleri
Araha.15442s0001 1.0kb upstream 1.0kb upstream 4586 true Scaffold15442: 47-4632 Arabidopsis halleri
Araha.15442s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold15442: 3633-4632 Arabidopsis halleri
Araha.15442s0001 1.0kb downstream 1.0kb downstream 3632 true Scaffold15442: 1-3632 Arabidopsis halleri
Araha.15442s0001 1.0kb downstream 1.0kb downstream 46 false Scaffold15442: 1-46 Arabidopsis halleri
Araha.15442s0001 2.0kb upstream 2.0kb upstream 5586 true Scaffold15442: 47-5632 Arabidopsis halleri
Araha.15442s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold15442: 3633-5632 Arabidopsis halleri
Araha.15442s0001 2.0kb downstream 2.0kb downstream 3632 true Scaffold15442: 1-3632 Arabidopsis halleri
Araha.15442s0001 2.0kb downstream 2.0kb downstream 46 false Scaffold15442: 1-46 Arabidopsis halleri
Araha.15442s0001 5.0kb upstream 5.0kb upstream 6443 true Scaffold15442: 47-6489 Arabidopsis halleri
Araha.15442s0001 5.0kb upstream 5.0kb upstream 2857 false Scaffold15442: 3633-6489 Arabidopsis halleri
Araha.15442s0001 5.0kb downstream 5.0kb downstream 3632 true Scaffold15442: 1-3632 Arabidopsis halleri
Araha.15442s0001 5.0kb downstream 5.0kb downstream 46 false Scaffold15442: 1-46 Arabidopsis halleri
Araha.15442s0001 10.0kb upstream 10.0kb upstream 6443 true Scaffold15442: 47-6489 Arabidopsis halleri
Araha.15442s0001 10.0kb upstream 10.0kb upstream 2857 false Scaffold15442: 3633-6489 Arabidopsis halleri
Araha.15442s0001 10.0kb downstream 10.0kb downstream 3632 true Scaffold15442: 1-3632 Arabidopsis halleri
Araha.15442s0001 10.0kb downstream 10.0kb downstream 46 false Scaffold15442: 1-46 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361574 5261 Brassicaceae View MSA
123828926 5264 Brassicales-Malvales View MSA
124338050 5266 SBM View MSA
124240760 5268 Malvidae View MSA
124063864 5270 Rosid View MSA
123737377 5271 Pentapetalae View MSA
122788371 5272 Eudicot View MSA
122045430 5273 Angiosperm View MSA
121344510 5274 Embryophyte View MSA
123428056 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain