Gene : Araha.6938s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR14255:SF4 - ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN Genomic Order:  2
Name:  ? Araha.6938s0002 Secondary Identifier:  ? PAC:28851757

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6938s0002 0.5kb upstream 0.5kb upstream 4149 true Scaffold6938: 17544-21692 Arabidopsis halleri
Araha.6938s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6938: 17544-18043 Arabidopsis halleri
Araha.6938s0002 0.5kb downstream 0.5kb downstream 4149 true Scaffold6938: 18044-22192 Arabidopsis halleri
Araha.6938s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6938: 21693-22192 Arabidopsis halleri
Araha.6938s0002 1.0kb upstream 1.0kb upstream 4649 true Scaffold6938: 17044-21692 Arabidopsis halleri
Araha.6938s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6938: 17044-18043 Arabidopsis halleri
Araha.6938s0002 1.0kb downstream 1.0kb downstream 4649 true Scaffold6938: 18044-22692 Arabidopsis halleri
Araha.6938s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6938: 21693-22692 Arabidopsis halleri
Araha.6938s0002 2.0kb upstream 2.0kb upstream 5649 true Scaffold6938: 16044-21692 Arabidopsis halleri
Araha.6938s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6938: 16044-18043 Arabidopsis halleri
Araha.6938s0002 2.0kb downstream 2.0kb downstream 5649 true Scaffold6938: 18044-23692 Arabidopsis halleri
Araha.6938s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6938: 21693-23692 Arabidopsis halleri
Araha.6938s0002 5.0kb upstream 5.0kb upstream 8649 true Scaffold6938: 13044-21692 Arabidopsis halleri
Araha.6938s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6938: 13044-18043 Arabidopsis halleri
Araha.6938s0002 5.0kb downstream 5.0kb downstream 8649 true Scaffold6938: 18044-26692 Arabidopsis halleri
Araha.6938s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6938: 21693-26692 Arabidopsis halleri
Araha.6938s0002 10.0kb upstream 10.0kb upstream 13649 true Scaffold6938: 8044-21692 Arabidopsis halleri
Araha.6938s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold6938: 8044-18043 Arabidopsis halleri
Araha.6938s0002 10.0kb downstream 10.0kb downstream 13649 true Scaffold6938: 18044-31692 Arabidopsis halleri
Araha.6938s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold6938: 21693-31692 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365752 5261 Brassicaceae View MSA
123830582 5264 Brassicales-Malvales View MSA
124345327 5266 SBM View MSA
124237787 5268 Malvidae View MSA
124067283 5270 Rosid View MSA
123737024 5271 Pentapetalae View MSA
122788451 5272 Eudicot View MSA
122043636 5273 Angiosperm View MSA
121351486 5274 Embryophyte View MSA
123427639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain