Gene : Araha.16220s0011 A. halleri v1.1
Defline:  (1 of 2) 2.5.1.30 - Heptaprenyl diphosphate synthase / Trans-hexaprenyltranstransferase Genomic Order:  11
Name:  ? Araha.16220s0011 Secondary Identifier:  ? PAC:28860951
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri HEXPPSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-5120 Arabidopsis halleri pathologic  
Ahalleri PWY-5783 Arabidopsis halleri pathologic  
Ahalleri PWY-5805 Arabidopsis halleri pathologic  
Ahalleri PWY-5807 Arabidopsis halleri pathologic  
Ahalleri PWY-5864 Arabidopsis halleri pathologic  
Ahalleri PWY-5910 Arabidopsis halleri pathologic  
Ahalleri PWY-6520 Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16220s0011 0.5kb upstream 0.5kb upstream 2644 true Scaffold16220: 39093-41736 Arabidopsis halleri
Araha.16220s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold16220: 39093-39592 Arabidopsis halleri
Araha.16220s0011 0.5kb downstream 0.5kb downstream 2644 true Scaffold16220: 39593-42236 Arabidopsis halleri
Araha.16220s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold16220: 41737-42236 Arabidopsis halleri
Araha.16220s0011 1.0kb upstream 1.0kb upstream 3144 true Scaffold16220: 38593-41736 Arabidopsis halleri
Araha.16220s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold16220: 38593-39592 Arabidopsis halleri
Araha.16220s0011 1.0kb downstream 1.0kb downstream 3144 true Scaffold16220: 39593-42736 Arabidopsis halleri
Araha.16220s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold16220: 41737-42736 Arabidopsis halleri
Araha.16220s0011 2.0kb upstream 2.0kb upstream 4144 true Scaffold16220: 37593-41736 Arabidopsis halleri
Araha.16220s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold16220: 37593-39592 Arabidopsis halleri
Araha.16220s0011 2.0kb downstream 2.0kb downstream 4144 true Scaffold16220: 39593-43736 Arabidopsis halleri
Araha.16220s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold16220: 41737-43736 Arabidopsis halleri
Araha.16220s0011 5.0kb upstream 5.0kb upstream 7144 true Scaffold16220: 34593-41736 Arabidopsis halleri
Araha.16220s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold16220: 34593-39592 Arabidopsis halleri
Araha.16220s0011 5.0kb downstream 5.0kb downstream 7144 true Scaffold16220: 39593-46736 Arabidopsis halleri
Araha.16220s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold16220: 41737-46736 Arabidopsis halleri
Araha.16220s0011 10.0kb upstream 10.0kb upstream 12144 true Scaffold16220: 29593-41736 Arabidopsis halleri
Araha.16220s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold16220: 29593-39592 Arabidopsis halleri
Araha.16220s0011 10.0kb downstream 10.0kb downstream 9553 true Scaffold16220: 39593-49145 Arabidopsis halleri
Araha.16220s0011 10.0kb downstream 10.0kb downstream 7409 false Scaffold16220: 41737-49145 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
122373293 5261 Brassicaceae View MSA
123836843 5264 Brassicales-Malvales View MSA
124340662 5266 SBM View MSA
124241252 5268 Malvidae View MSA
124065347 5270 Rosid View MSA
123746184 5271 Pentapetalae View MSA
122791358 5272 Eudicot View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain