Gene : Araha.16400s0007 A. halleri v1.1
Defline:  (1 of 1) PTHR30239:SF6 - ACETOLACTATE SYNTHASE SMALL SUBUNIT 1, CHLOROPLASTIC Genomic Order:  7
Name:  ? Araha.16400s0007 Secondary Identifier:  ? PAC:28845835
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri BRANCHED-CHAIN-AA-SYN-PWY Arabidopsis halleri pathologic  
Ahalleri ILEUSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3001 Arabidopsis halleri pathologic  
Ahalleri VALSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16400s0007 0.5kb upstream 0.5kb upstream 4729 true Scaffold16400: 27855-32583 Arabidopsis halleri
Araha.16400s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold16400: 27855-28354 Arabidopsis halleri
Araha.16400s0007 0.5kb downstream 0.5kb downstream 4729 true Scaffold16400: 28355-33083 Arabidopsis halleri
Araha.16400s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold16400: 32584-33083 Arabidopsis halleri
Araha.16400s0007 1.0kb upstream 1.0kb upstream 5229 true Scaffold16400: 27355-32583 Arabidopsis halleri
Araha.16400s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold16400: 27355-28354 Arabidopsis halleri
Araha.16400s0007 1.0kb downstream 1.0kb downstream 5229 true Scaffold16400: 28355-33583 Arabidopsis halleri
Araha.16400s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold16400: 32584-33583 Arabidopsis halleri
Araha.16400s0007 2.0kb upstream 2.0kb upstream 6229 true Scaffold16400: 26355-32583 Arabidopsis halleri
Araha.16400s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold16400: 26355-28354 Arabidopsis halleri
Araha.16400s0007 2.0kb downstream 2.0kb downstream 6229 true Scaffold16400: 28355-34583 Arabidopsis halleri
Araha.16400s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold16400: 32584-34583 Arabidopsis halleri
Araha.16400s0007 5.0kb upstream 5.0kb upstream 9229 true Scaffold16400: 23355-32583 Arabidopsis halleri
Araha.16400s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold16400: 23355-28354 Arabidopsis halleri
Araha.16400s0007 5.0kb downstream 5.0kb downstream 9229 true Scaffold16400: 28355-37583 Arabidopsis halleri
Araha.16400s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold16400: 32584-37583 Arabidopsis halleri
Araha.16400s0007 10.0kb upstream 10.0kb upstream 14229 true Scaffold16400: 18355-32583 Arabidopsis halleri
Araha.16400s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold16400: 18355-28354 Arabidopsis halleri
Araha.16400s0007 10.0kb downstream 10.0kb downstream 14210 true Scaffold16400: 28355-42564 Arabidopsis halleri
Araha.16400s0007 10.0kb downstream 10.0kb downstream 9981 false Scaffold16400: 32584-42564 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122368277 5261 Brassicaceae View MSA
123831062 5264 Brassicales-Malvales View MSA
124348277 5266 SBM View MSA
124249637 5268 Malvidae View MSA
124071957 5270 Rosid View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain