Gene : Araha.16250s0004 A. halleri v1.1

Defline:  (1 of 2) PTHR18966:SF190 - GLUTAMATE RECEPTOR 3.4-RELATED Genomic Order:  4
Name:  ? Araha.16250s0004 Secondary Identifier:  ? PAC:28846611

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16250s0004 0.5kb upstream 0.5kb upstream 4114 true Scaffold16250: 13840-17953 Arabidopsis halleri
Araha.16250s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold16250: 13840-14339 Arabidopsis halleri
Araha.16250s0004 0.5kb downstream 0.5kb downstream 4114 true Scaffold16250: 14340-18453 Arabidopsis halleri
Araha.16250s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold16250: 17954-18453 Arabidopsis halleri
Araha.16250s0004 1.0kb upstream 1.0kb upstream 4614 true Scaffold16250: 13340-17953 Arabidopsis halleri
Araha.16250s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold16250: 13340-14339 Arabidopsis halleri
Araha.16250s0004 1.0kb downstream 1.0kb downstream 4614 true Scaffold16250: 14340-18953 Arabidopsis halleri
Araha.16250s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold16250: 17954-18953 Arabidopsis halleri
Araha.16250s0004 2.0kb upstream 2.0kb upstream 5614 true Scaffold16250: 12340-17953 Arabidopsis halleri
Araha.16250s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold16250: 12340-14339 Arabidopsis halleri
Araha.16250s0004 2.0kb downstream 2.0kb downstream 5614 true Scaffold16250: 14340-19953 Arabidopsis halleri
Araha.16250s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold16250: 17954-19953 Arabidopsis halleri
Araha.16250s0004 5.0kb upstream 5.0kb upstream 8614 true Scaffold16250: 9340-17953 Arabidopsis halleri
Araha.16250s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold16250: 9340-14339 Arabidopsis halleri
Araha.16250s0004 5.0kb downstream 5.0kb downstream 8614 true Scaffold16250: 14340-22953 Arabidopsis halleri
Araha.16250s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold16250: 17954-22953 Arabidopsis halleri
Araha.16250s0004 10.0kb upstream 10.0kb upstream 13614 true Scaffold16250: 4340-17953 Arabidopsis halleri
Araha.16250s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold16250: 4340-14339 Arabidopsis halleri
Araha.16250s0004 10.0kb downstream 10.0kb downstream 10727 true Scaffold16250: 14340-25066 Arabidopsis halleri
Araha.16250s0004 10.0kb downstream 10.0kb downstream 7113 false Scaffold16250: 17954-25066 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121484885 5273 Angiosperm Singleton cluster - no MSA
122318602 5261 Brassicaceae Singleton cluster - no MSA
123760202 5264 Brassicales-Malvales Singleton cluster - no MSA
124258837 5266 SBM Singleton cluster - no MSA
124115460 5268 Malvidae Singleton cluster - no MSA
123844852 5270 Rosid Singleton cluster - no MSA
123431133 5271 Pentapetalae Singleton cluster - no MSA
122466754 5272 Eudicot Singleton cluster - no MSA
120758279 5274 Embryophyte Singleton cluster - no MSA
122800739 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain