Gene : Araha.15953s0001 A. halleri v1.1

Defline:  (1 of 29) PF03000 - NPH3 family (NPH3) Genomic Order:  1
Name:  ? Araha.15953s0001 Secondary Identifier:  ? PAC:28840449

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.15953s0001 0.5kb upstream 0.5kb upstream 3471 true Scaffold15953: 4410-7880 Arabidopsis halleri
Araha.15953s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold15953: 4410-4909 Arabidopsis halleri
Araha.15953s0001 0.5kb downstream 0.5kb downstream 3471 true Scaffold15953: 4910-8380 Arabidopsis halleri
Araha.15953s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold15953: 7881-8380 Arabidopsis halleri
Araha.15953s0001 1.0kb upstream 1.0kb upstream 3971 true Scaffold15953: 3910-7880 Arabidopsis halleri
Araha.15953s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold15953: 3910-4909 Arabidopsis halleri
Araha.15953s0001 1.0kb downstream 1.0kb downstream 3971 true Scaffold15953: 4910-8880 Arabidopsis halleri
Araha.15953s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold15953: 7881-8880 Arabidopsis halleri
Araha.15953s0001 2.0kb upstream 2.0kb upstream 4971 true Scaffold15953: 2910-7880 Arabidopsis halleri
Araha.15953s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold15953: 2910-4909 Arabidopsis halleri
Araha.15953s0001 2.0kb downstream 2.0kb downstream 4971 true Scaffold15953: 4910-9880 Arabidopsis halleri
Araha.15953s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold15953: 7881-9880 Arabidopsis halleri
Araha.15953s0001 5.0kb upstream 5.0kb upstream 7880 true Scaffold15953: 1-7880 Arabidopsis halleri
Araha.15953s0001 5.0kb upstream 5.0kb upstream 4909 false Scaffold15953: 1-4909 Arabidopsis halleri
Araha.15953s0001 5.0kb downstream 5.0kb downstream 7032 true Scaffold15953: 4910-11941 Arabidopsis halleri
Araha.15953s0001 5.0kb downstream 5.0kb downstream 4061 false Scaffold15953: 7881-11941 Arabidopsis halleri
Araha.15953s0001 10.0kb upstream 10.0kb upstream 7880 true Scaffold15953: 1-7880 Arabidopsis halleri
Araha.15953s0001 10.0kb upstream 10.0kb upstream 4909 false Scaffold15953: 1-4909 Arabidopsis halleri
Araha.15953s0001 10.0kb downstream 10.0kb downstream 7032 true Scaffold15953: 4910-11941 Arabidopsis halleri
Araha.15953s0001 10.0kb downstream 10.0kb downstream 4061 false Scaffold15953: 7881-11941 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378272 5261 Brassicaceae View MSA
123836731 5264 Brassicales-Malvales View MSA
124346744 5266 SBM View MSA
124246387 5268 Malvidae View MSA
124069355 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain