Gene : Araha.16035s0002 A. halleri v1.1
Defline:  (1 of 1) 4.2.1.70 - Pseudouridylate synthase / Uracil hydrolyase Genomic Order:  2
Name:  ? Araha.16035s0002 Secondary Identifier:  ? PAC:28845348
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6019 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16035s0002 0.5kb upstream 0.5kb upstream 2801 true Scaffold16035: 1267-4067 Arabidopsis halleri
Araha.16035s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold16035: 1267-1766 Arabidopsis halleri
Araha.16035s0002 0.5kb downstream 0.5kb downstream 2801 true Scaffold16035: 1767-4567 Arabidopsis halleri
Araha.16035s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold16035: 4068-4567 Arabidopsis halleri
Araha.16035s0002 1.0kb upstream 1.0kb upstream 3301 true Scaffold16035: 767-4067 Arabidopsis halleri
Araha.16035s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold16035: 767-1766 Arabidopsis halleri
Araha.16035s0002 1.0kb downstream 1.0kb downstream 3301 true Scaffold16035: 1767-5067 Arabidopsis halleri
Araha.16035s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold16035: 4068-5067 Arabidopsis halleri
Araha.16035s0002 2.0kb upstream 2.0kb upstream 4067 true Scaffold16035: 1-4067 Arabidopsis halleri
Araha.16035s0002 2.0kb upstream 2.0kb upstream 1766 false Scaffold16035: 1-1766 Arabidopsis halleri
Araha.16035s0002 2.0kb downstream 2.0kb downstream 4301 true Scaffold16035: 1767-6067 Arabidopsis halleri
Araha.16035s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold16035: 4068-6067 Arabidopsis halleri
Araha.16035s0002 5.0kb upstream 5.0kb upstream 4067 true Scaffold16035: 1-4067 Arabidopsis halleri
Araha.16035s0002 5.0kb upstream 5.0kb upstream 1766 false Scaffold16035: 1-1766 Arabidopsis halleri
Araha.16035s0002 5.0kb downstream 5.0kb downstream 7301 true Scaffold16035: 1767-9067 Arabidopsis halleri
Araha.16035s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold16035: 4068-9067 Arabidopsis halleri
Araha.16035s0002 10.0kb upstream 10.0kb upstream 4067 true Scaffold16035: 1-4067 Arabidopsis halleri
Araha.16035s0002 10.0kb upstream 10.0kb upstream 1766 false Scaffold16035: 1-1766 Arabidopsis halleri
Araha.16035s0002 10.0kb downstream 10.0kb downstream 12301 true Scaffold16035: 1767-14067 Arabidopsis halleri
Araha.16035s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold16035: 4068-14067 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364715 5261 Brassicaceae View MSA
123827681 5264 Brassicales-Malvales View MSA
124345381 5266 SBM View MSA
124243615 5268 Malvidae View MSA
124062436 5270 Rosid View MSA
123743490 5271 Pentapetalae View MSA
122793573 5272 Eudicot View MSA
122043730 5273 Angiosperm View MSA
121347551 5274 Embryophyte View MSA
123427150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain