Gene : Araha.16919s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR16201:SF43 - PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN Genomic Order:  2
Name:  ? Araha.16919s0002 Secondary Identifier:  ? PAC:28848006

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16919s0002 0.5kb upstream 0.5kb upstream 3012 true Scaffold16919: 810-3821 Arabidopsis halleri
Araha.16919s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold16919: 3322-3821 Arabidopsis halleri
Araha.16919s0002 0.5kb downstream 0.5kb downstream 3012 true Scaffold16919: 310-3321 Arabidopsis halleri
Araha.16919s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold16919: 310-809 Arabidopsis halleri
Araha.16919s0002 1.0kb upstream 1.0kb upstream 3512 true Scaffold16919: 810-4321 Arabidopsis halleri
Araha.16919s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold16919: 3322-4321 Arabidopsis halleri
Araha.16919s0002 1.0kb downstream 1.0kb downstream 3321 true Scaffold16919: 1-3321 Arabidopsis halleri
Araha.16919s0002 1.0kb downstream 1.0kb downstream 809 false Scaffold16919: 1-809 Arabidopsis halleri
Araha.16919s0002 2.0kb upstream 2.0kb upstream 4512 true Scaffold16919: 810-5321 Arabidopsis halleri
Araha.16919s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold16919: 3322-5321 Arabidopsis halleri
Araha.16919s0002 2.0kb downstream 2.0kb downstream 3321 true Scaffold16919: 1-3321 Arabidopsis halleri
Araha.16919s0002 2.0kb downstream 2.0kb downstream 809 false Scaffold16919: 1-809 Arabidopsis halleri
Araha.16919s0002 5.0kb upstream 5.0kb upstream 7512 true Scaffold16919: 810-8321 Arabidopsis halleri
Araha.16919s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold16919: 3322-8321 Arabidopsis halleri
Araha.16919s0002 5.0kb downstream 5.0kb downstream 3321 true Scaffold16919: 1-3321 Arabidopsis halleri
Araha.16919s0002 5.0kb downstream 5.0kb downstream 809 false Scaffold16919: 1-809 Arabidopsis halleri
Araha.16919s0002 10.0kb upstream 10.0kb upstream 12512 true Scaffold16919: 810-13321 Arabidopsis halleri
Araha.16919s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold16919: 3322-13321 Arabidopsis halleri
Araha.16919s0002 10.0kb downstream 10.0kb downstream 3321 true Scaffold16919: 1-3321 Arabidopsis halleri
Araha.16919s0002 10.0kb downstream 10.0kb downstream 809 false Scaffold16919: 1-809 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374415 5261 Brassicaceae View MSA
123833507 5264 Brassicales-Malvales View MSA
124346212 5266 SBM View MSA
124242114 5268 Malvidae View MSA
124069228 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain