Gene : Araha.16915s0001 A. halleri v1.1

Defline:  (1 of 2) PTHR31867:SF5 - EXPANSIN-A16-RELATED Genomic Order:  1
Name:  ? Araha.16915s0001 Secondary Identifier:  ? PAC:28856688

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16915s0001 0.5kb upstream 0.5kb upstream 1920 true Scaffold16915: 7388-9307 Arabidopsis halleri
Araha.16915s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold16915: 7388-7887 Arabidopsis halleri
Araha.16915s0001 0.5kb downstream 0.5kb downstream 1920 true Scaffold16915: 7888-9807 Arabidopsis halleri
Araha.16915s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold16915: 9308-9807 Arabidopsis halleri
Araha.16915s0001 1.0kb upstream 1.0kb upstream 2420 true Scaffold16915: 6888-9307 Arabidopsis halleri
Araha.16915s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold16915: 6888-7887 Arabidopsis halleri
Araha.16915s0001 1.0kb downstream 1.0kb downstream 2420 true Scaffold16915: 7888-10307 Arabidopsis halleri
Araha.16915s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold16915: 9308-10307 Arabidopsis halleri
Araha.16915s0001 2.0kb upstream 2.0kb upstream 3420 true Scaffold16915: 5888-9307 Arabidopsis halleri
Araha.16915s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold16915: 5888-7887 Arabidopsis halleri
Araha.16915s0001 2.0kb downstream 2.0kb downstream 3420 true Scaffold16915: 7888-11307 Arabidopsis halleri
Araha.16915s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold16915: 9308-11307 Arabidopsis halleri
Araha.16915s0001 5.0kb upstream 5.0kb upstream 6420 true Scaffold16915: 2888-9307 Arabidopsis halleri
Araha.16915s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold16915: 2888-7887 Arabidopsis halleri
Araha.16915s0001 5.0kb downstream 5.0kb downstream 6420 true Scaffold16915: 7888-14307 Arabidopsis halleri
Araha.16915s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold16915: 9308-14307 Arabidopsis halleri
Araha.16915s0001 10.0kb upstream 10.0kb upstream 9307 true Scaffold16915: 1-9307 Arabidopsis halleri
Araha.16915s0001 10.0kb upstream 10.0kb upstream 7887 false Scaffold16915: 1-7887 Arabidopsis halleri
Araha.16915s0001 10.0kb downstream 10.0kb downstream 7187 true Scaffold16915: 7888-15074 Arabidopsis halleri
Araha.16915s0001 10.0kb downstream 10.0kb downstream 5767 false Scaffold16915: 9308-15074 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351028 5266 SBM View MSA
122362760 5261 Brassicaceae View MSA
123839311 5264 Brassicales-Malvales View MSA
124249607 5268 Malvidae View MSA
124071064 5270 Rosid View MSA
123750763 5271 Pentapetalae View MSA
122796391 5272 Eudicot View MSA
122047888 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain