Gene : Araha.16597s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR22808 - NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING Genomic Order:  1
Name:  ? Araha.16597s0001 Secondary Identifier:  ? PAC:28853396
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6829 Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16597s0001 0.5kb upstream 0.5kb upstream 2660 true Scaffold16597: 1-2660 Arabidopsis halleri
Araha.16597s0001 0.5kb upstream 0.5kb upstream 5 false Scaffold16597: 1-5 Arabidopsis halleri
Araha.16597s0001 0.5kb downstream 0.5kb downstream 3155 true Scaffold16597: 6-3160 Arabidopsis halleri
Araha.16597s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold16597: 2661-3160 Arabidopsis halleri
Araha.16597s0001 1.0kb upstream 1.0kb upstream 2660 true Scaffold16597: 1-2660 Arabidopsis halleri
Araha.16597s0001 1.0kb upstream 1.0kb upstream 5 false Scaffold16597: 1-5 Arabidopsis halleri
Araha.16597s0001 1.0kb downstream 1.0kb downstream 3655 true Scaffold16597: 6-3660 Arabidopsis halleri
Araha.16597s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold16597: 2661-3660 Arabidopsis halleri
Araha.16597s0001 2.0kb upstream 2.0kb upstream 2660 true Scaffold16597: 1-2660 Arabidopsis halleri
Araha.16597s0001 2.0kb upstream 2.0kb upstream 5 false Scaffold16597: 1-5 Arabidopsis halleri
Araha.16597s0001 2.0kb downstream 2.0kb downstream 4655 true Scaffold16597: 6-4660 Arabidopsis halleri
Araha.16597s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold16597: 2661-4660 Arabidopsis halleri
Araha.16597s0001 5.0kb upstream 5.0kb upstream 2660 true Scaffold16597: 1-2660 Arabidopsis halleri
Araha.16597s0001 5.0kb upstream 5.0kb upstream 5 false Scaffold16597: 1-5 Arabidopsis halleri
Araha.16597s0001 5.0kb downstream 5.0kb downstream 7655 true Scaffold16597: 6-7660 Arabidopsis halleri
Araha.16597s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold16597: 2661-7660 Arabidopsis halleri
Araha.16597s0001 10.0kb upstream 10.0kb upstream 2660 true Scaffold16597: 1-2660 Arabidopsis halleri
Araha.16597s0001 10.0kb upstream 10.0kb upstream 5 false Scaffold16597: 1-5 Arabidopsis halleri
Araha.16597s0001 10.0kb downstream 10.0kb downstream 12655 true Scaffold16597: 6-12660 Arabidopsis halleri
Araha.16597s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold16597: 2661-12660 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368529 5261 Brassicaceae View MSA
123799592 5264 Brassicales-Malvales View MSA
124297094 5266 SBM View MSA
124251065 5268 Malvidae View MSA
123952562 5270 Rosid View MSA
123530294 5271 Pentapetalae View MSA
122565260 5272 Eudicot View MSA
122043899 5273 Angiosperm View MSA
121349940 5274 Embryophyte View MSA
123426394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain