Gene : Araha.16688s0005 A. halleri v1.1

Defline:  (1 of 1) PTHR10641:SF649 - MYB TRANSCRIPTION FACTOR Genomic Order:  5
Name:  ? Araha.16688s0005 Secondary Identifier:  ? PAC:28852310

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16688s0005 0.5kb upstream 0.5kb upstream 1435 true Scaffold16688: 21366-22800 Arabidopsis halleri
Araha.16688s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold16688: 22301-22800 Arabidopsis halleri
Araha.16688s0005 0.5kb downstream 0.5kb downstream 1435 true Scaffold16688: 20866-22300 Arabidopsis halleri
Araha.16688s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold16688: 20866-21365 Arabidopsis halleri
Araha.16688s0005 1.0kb upstream 1.0kb upstream 1935 true Scaffold16688: 21366-23300 Arabidopsis halleri
Araha.16688s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold16688: 22301-23300 Arabidopsis halleri
Araha.16688s0005 1.0kb downstream 1.0kb downstream 1935 true Scaffold16688: 20366-22300 Arabidopsis halleri
Araha.16688s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold16688: 20366-21365 Arabidopsis halleri
Araha.16688s0005 2.0kb upstream 2.0kb upstream 2935 true Scaffold16688: 21366-24300 Arabidopsis halleri
Araha.16688s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold16688: 22301-24300 Arabidopsis halleri
Araha.16688s0005 2.0kb downstream 2.0kb downstream 2935 true Scaffold16688: 19366-22300 Arabidopsis halleri
Araha.16688s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold16688: 19366-21365 Arabidopsis halleri
Araha.16688s0005 5.0kb upstream 5.0kb upstream 5935 true Scaffold16688: 21366-27300 Arabidopsis halleri
Araha.16688s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold16688: 22301-27300 Arabidopsis halleri
Araha.16688s0005 5.0kb downstream 5.0kb downstream 5935 true Scaffold16688: 16366-22300 Arabidopsis halleri
Araha.16688s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold16688: 16366-21365 Arabidopsis halleri
Araha.16688s0005 10.0kb upstream 10.0kb upstream 10935 true Scaffold16688: 21366-32300 Arabidopsis halleri
Araha.16688s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold16688: 22301-32300 Arabidopsis halleri
Araha.16688s0005 10.0kb downstream 10.0kb downstream 10935 true Scaffold16688: 11366-22300 Arabidopsis halleri
Araha.16688s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold16688: 11366-21365 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371751 5261 Brassicaceae View MSA
123838141 5264 Brassicales-Malvales View MSA
124347477 5266 SBM View MSA
124245509 5268 Malvidae View MSA
124071905 5270 Rosid View MSA
123742365 5271 Pentapetalae View MSA
122786353 5272 Eudicot View MSA
122041788 5273 Angiosperm View MSA
121350452 5274 Embryophyte View MSA
123381739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain