Gene : Araha.17959s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR31133:SF2 - EXPRESSED PROTEIN Genomic Order:  2
Name:  ? Araha.17959s0002 Secondary Identifier:  ? PAC:28848935

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.17959s0002 0.5kb upstream 0.5kb upstream 3730 true Scaffold17959: 4234-7963 Arabidopsis halleri
Araha.17959s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold17959: 4234-4733 Arabidopsis halleri
Araha.17959s0002 0.5kb downstream 0.5kb downstream 3730 true Scaffold17959: 4734-8463 Arabidopsis halleri
Araha.17959s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold17959: 7964-8463 Arabidopsis halleri
Araha.17959s0002 1.0kb upstream 1.0kb upstream 4230 true Scaffold17959: 3734-7963 Arabidopsis halleri
Araha.17959s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold17959: 3734-4733 Arabidopsis halleri
Araha.17959s0002 1.0kb downstream 1.0kb downstream 4230 true Scaffold17959: 4734-8963 Arabidopsis halleri
Araha.17959s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold17959: 7964-8963 Arabidopsis halleri
Araha.17959s0002 2.0kb upstream 2.0kb upstream 5230 true Scaffold17959: 2734-7963 Arabidopsis halleri
Araha.17959s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold17959: 2734-4733 Arabidopsis halleri
Araha.17959s0002 2.0kb downstream 2.0kb downstream 5230 true Scaffold17959: 4734-9963 Arabidopsis halleri
Araha.17959s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold17959: 7964-9963 Arabidopsis halleri
Araha.17959s0002 5.0kb upstream 5.0kb upstream 7963 true Scaffold17959: 1-7963 Arabidopsis halleri
Araha.17959s0002 5.0kb upstream 5.0kb upstream 4733 false Scaffold17959: 1-4733 Arabidopsis halleri
Araha.17959s0002 5.0kb downstream 5.0kb downstream 8090 true Scaffold17959: 4734-12823 Arabidopsis halleri
Araha.17959s0002 5.0kb downstream 5.0kb downstream 4860 false Scaffold17959: 7964-12823 Arabidopsis halleri
Araha.17959s0002 10.0kb upstream 10.0kb upstream 7963 true Scaffold17959: 1-7963 Arabidopsis halleri
Araha.17959s0002 10.0kb upstream 10.0kb upstream 4733 false Scaffold17959: 1-4733 Arabidopsis halleri
Araha.17959s0002 10.0kb downstream 10.0kb downstream 8090 true Scaffold17959: 4734-12823 Arabidopsis halleri
Araha.17959s0002 10.0kb downstream 10.0kb downstream 4860 false Scaffold17959: 7964-12823 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343637 5261 Brassicaceae View MSA
123827815 5264 Brassicales-Malvales View MSA
124336413 5266 SBM View MSA
124250227 5268 Malvidae View MSA
124066671 5270 Rosid View MSA
123736782 5271 Pentapetalae View MSA
122792901 5272 Eudicot View MSA
122043986 5273 Angiosperm View MSA
121350434 5274 Embryophyte View MSA
123381729 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain