Gene : Araha.17454s0013 A. halleri v1.1

Defline:  (1 of 1) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  13
Name:  ? Araha.17454s0013 Secondary Identifier:  ? PAC:28849671

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ANAEROFRUCAT-PWY Arabidopsis halleri pathologic  
Ahalleri ANAGLYCOLYSIS-PWY Arabidopsis halleri pathologic  
Ahalleri GLUCOSE1PMETAB-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-621 Arabidopsis halleri pathologic  
Ahalleri PWY-7238 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.17454s0013 0.5kb upstream 0.5kb upstream 3256 true Scaffold17454: 40284-43539 Arabidopsis halleri
Araha.17454s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold17454: 40284-40783 Arabidopsis halleri
Araha.17454s0013 0.5kb downstream 0.5kb downstream 3256 true Scaffold17454: 40784-44039 Arabidopsis halleri
Araha.17454s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold17454: 43540-44039 Arabidopsis halleri
Araha.17454s0013 1.0kb upstream 1.0kb upstream 3756 true Scaffold17454: 39784-43539 Arabidopsis halleri
Araha.17454s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold17454: 39784-40783 Arabidopsis halleri
Araha.17454s0013 1.0kb downstream 1.0kb downstream 3756 true Scaffold17454: 40784-44539 Arabidopsis halleri
Araha.17454s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold17454: 43540-44539 Arabidopsis halleri
Araha.17454s0013 2.0kb upstream 2.0kb upstream 4756 true Scaffold17454: 38784-43539 Arabidopsis halleri
Araha.17454s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold17454: 38784-40783 Arabidopsis halleri
Araha.17454s0013 2.0kb downstream 2.0kb downstream 4756 true Scaffold17454: 40784-45539 Arabidopsis halleri
Araha.17454s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold17454: 43540-45539 Arabidopsis halleri
Araha.17454s0013 5.0kb upstream 5.0kb upstream 7756 true Scaffold17454: 35784-43539 Arabidopsis halleri
Araha.17454s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold17454: 35784-40783 Arabidopsis halleri
Araha.17454s0013 5.0kb downstream 5.0kb downstream 7756 true Scaffold17454: 40784-48539 Arabidopsis halleri
Araha.17454s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold17454: 43540-48539 Arabidopsis halleri
Araha.17454s0013 10.0kb upstream 10.0kb upstream 12756 true Scaffold17454: 30784-43539 Arabidopsis halleri
Araha.17454s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold17454: 30784-40783 Arabidopsis halleri
Araha.17454s0013 10.0kb downstream 10.0kb downstream 12756 true Scaffold17454: 40784-53539 Arabidopsis halleri
Araha.17454s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold17454: 43540-53539 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374255 5261 Brassicaceae View MSA
123800714 5264 Brassicales-Malvales View MSA
124346939 5266 SBM View MSA
124240736 5268 Malvidae View MSA
124061792 5270 Rosid View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain