Gene : Araha.18444s0007 A. halleri v1.1

Defline:  (1 of 1) PTHR13017 - 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED Genomic Order:  7
Name:  ? Araha.18444s0007 Secondary Identifier:  ? PAC:28839136

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.18444s0007 0.5kb upstream 0.5kb upstream 2434 true Scaffold18444: 25643-28076 Arabidopsis halleri
Araha.18444s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold18444: 25643-26142 Arabidopsis halleri
Araha.18444s0007 0.5kb downstream 0.5kb downstream 2434 true Scaffold18444: 26143-28576 Arabidopsis halleri
Araha.18444s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold18444: 28077-28576 Arabidopsis halleri
Araha.18444s0007 1.0kb upstream 1.0kb upstream 2934 true Scaffold18444: 25143-28076 Arabidopsis halleri
Araha.18444s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold18444: 25143-26142 Arabidopsis halleri
Araha.18444s0007 1.0kb downstream 1.0kb downstream 2535 true Scaffold18444: 26143-28677 Arabidopsis halleri
Araha.18444s0007 1.0kb downstream 1.0kb downstream 601 false Scaffold18444: 28077-28677 Arabidopsis halleri
Araha.18444s0007 2.0kb upstream 2.0kb upstream 3934 true Scaffold18444: 24143-28076 Arabidopsis halleri
Araha.18444s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold18444: 24143-26142 Arabidopsis halleri
Araha.18444s0007 2.0kb downstream 2.0kb downstream 2535 true Scaffold18444: 26143-28677 Arabidopsis halleri
Araha.18444s0007 2.0kb downstream 2.0kb downstream 601 false Scaffold18444: 28077-28677 Arabidopsis halleri
Araha.18444s0007 5.0kb upstream 5.0kb upstream 6934 true Scaffold18444: 21143-28076 Arabidopsis halleri
Araha.18444s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold18444: 21143-26142 Arabidopsis halleri
Araha.18444s0007 5.0kb downstream 5.0kb downstream 2535 true Scaffold18444: 26143-28677 Arabidopsis halleri
Araha.18444s0007 5.0kb downstream 5.0kb downstream 601 false Scaffold18444: 28077-28677 Arabidopsis halleri
Araha.18444s0007 10.0kb upstream 10.0kb upstream 11934 true Scaffold18444: 16143-28076 Arabidopsis halleri
Araha.18444s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold18444: 16143-26142 Arabidopsis halleri
Araha.18444s0007 10.0kb downstream 10.0kb downstream 2535 true Scaffold18444: 26143-28677 Arabidopsis halleri
Araha.18444s0007 10.0kb downstream 10.0kb downstream 601 false Scaffold18444: 28077-28677 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366806 5261 Brassicaceae View MSA
123831564 5264 Brassicales-Malvales View MSA
124341593 5266 SBM View MSA
124242262 5268 Malvidae View MSA
124060961 5270 Rosid View MSA
123740558 5271 Pentapetalae View MSA
122791388 5272 Eudicot View MSA
122041848 5273 Angiosperm View MSA
121347845 5274 Embryophyte View MSA
123425281 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain