Gene : Araha.18670s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR11817:SF14 - PLASTIDIAL PYRUVATE KINASE 1, CHLOROPLASTIC Genomic Order:  1
Name:  ? Araha.18670s0001 Secondary Identifier:  ? PAC:28862497

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ANAEROFRUCAT-PWY Arabidopsis halleri pathologic  
Ahalleri ANAGLYCOLYSIS-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-1042 Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY-5723 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.18670s0001 0.5kb upstream 0.5kb upstream 2665 true Scaffold18670: 37-2701 Arabidopsis halleri
Araha.18670s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold18670: 2202-2701 Arabidopsis halleri
Araha.18670s0001 0.5kb downstream 0.5kb downstream 2201 true Scaffold18670: 1-2201 Arabidopsis halleri
Araha.18670s0001 0.5kb downstream 0.5kb downstream 36 false Scaffold18670: 1-36 Arabidopsis halleri
Araha.18670s0001 1.0kb upstream 1.0kb upstream 3165 true Scaffold18670: 37-3201 Arabidopsis halleri
Araha.18670s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold18670: 2202-3201 Arabidopsis halleri
Araha.18670s0001 1.0kb downstream 1.0kb downstream 2201 true Scaffold18670: 1-2201 Arabidopsis halleri
Araha.18670s0001 1.0kb downstream 1.0kb downstream 36 false Scaffold18670: 1-36 Arabidopsis halleri
Araha.18670s0001 2.0kb upstream 2.0kb upstream 4165 true Scaffold18670: 37-4201 Arabidopsis halleri
Araha.18670s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold18670: 2202-4201 Arabidopsis halleri
Araha.18670s0001 2.0kb downstream 2.0kb downstream 2201 true Scaffold18670: 1-2201 Arabidopsis halleri
Araha.18670s0001 2.0kb downstream 2.0kb downstream 36 false Scaffold18670: 1-36 Arabidopsis halleri
Araha.18670s0001 5.0kb upstream 5.0kb upstream 7165 true Scaffold18670: 37-7201 Arabidopsis halleri
Araha.18670s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold18670: 2202-7201 Arabidopsis halleri
Araha.18670s0001 5.0kb downstream 5.0kb downstream 2201 true Scaffold18670: 1-2201 Arabidopsis halleri
Araha.18670s0001 5.0kb downstream 5.0kb downstream 36 false Scaffold18670: 1-36 Arabidopsis halleri
Araha.18670s0001 10.0kb upstream 10.0kb upstream 12165 true Scaffold18670: 37-12201 Arabidopsis halleri
Araha.18670s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold18670: 2202-12201 Arabidopsis halleri
Araha.18670s0001 10.0kb downstream 10.0kb downstream 2201 true Scaffold18670: 1-2201 Arabidopsis halleri
Araha.18670s0001 10.0kb downstream 10.0kb downstream 36 false Scaffold18670: 1-36 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361118 5261 Brassicaceae View MSA
123830504 5264 Brassicales-Malvales View MSA
124343810 5266 SBM View MSA
124241704 5268 Malvidae View MSA
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain