Gene : Araha.19157s0002 A. halleri v1.1
Defline:  (1 of 6) PTHR31736:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN-RELATED Genomic Order:  2
Name:  ? Araha.19157s0002 Secondary Identifier:  ? PAC:28845890
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19157s0002 0.5kb upstream 0.5kb upstream 2742 true Scaffold19157: 1405-4146 Arabidopsis halleri
Araha.19157s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold19157: 3647-4146 Arabidopsis halleri
Araha.19157s0002 0.5kb downstream 0.5kb downstream 2742 true Scaffold19157: 905-3646 Arabidopsis halleri
Araha.19157s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold19157: 905-1404 Arabidopsis halleri
Araha.19157s0002 1.0kb upstream 1.0kb upstream 3242 true Scaffold19157: 1405-4646 Arabidopsis halleri
Araha.19157s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold19157: 3647-4646 Arabidopsis halleri
Araha.19157s0002 1.0kb downstream 1.0kb downstream 3242 true Scaffold19157: 405-3646 Arabidopsis halleri
Araha.19157s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold19157: 405-1404 Arabidopsis halleri
Araha.19157s0002 2.0kb upstream 2.0kb upstream 4242 true Scaffold19157: 1405-5646 Arabidopsis halleri
Araha.19157s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold19157: 3647-5646 Arabidopsis halleri
Araha.19157s0002 2.0kb downstream 2.0kb downstream 3646 true Scaffold19157: 1-3646 Arabidopsis halleri
Araha.19157s0002 2.0kb downstream 2.0kb downstream 1404 false Scaffold19157: 1-1404 Arabidopsis halleri
Araha.19157s0002 5.0kb upstream 5.0kb upstream 7242 true Scaffold19157: 1405-8646 Arabidopsis halleri
Araha.19157s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold19157: 3647-8646 Arabidopsis halleri
Araha.19157s0002 5.0kb downstream 5.0kb downstream 3646 true Scaffold19157: 1-3646 Arabidopsis halleri
Araha.19157s0002 5.0kb downstream 5.0kb downstream 1404 false Scaffold19157: 1-1404 Arabidopsis halleri
Araha.19157s0002 10.0kb upstream 10.0kb upstream 12242 true Scaffold19157: 1405-13646 Arabidopsis halleri
Araha.19157s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold19157: 3647-13646 Arabidopsis halleri
Araha.19157s0002 10.0kb downstream 10.0kb downstream 3646 true Scaffold19157: 1-3646 Arabidopsis halleri
Araha.19157s0002 10.0kb downstream 10.0kb downstream 1404 false Scaffold19157: 1-1404 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373104 5261 Brassicaceae View MSA
123841125 5264 Brassicales-Malvales View MSA
124351120 5266 SBM View MSA
124249641 5268 Malvidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain