Gene : Araha.19012s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR33133:SF5 - EXPRESSED PROTEIN Genomic Order:  1
Name:  ? Araha.19012s0001 Secondary Identifier:  ? PAC:28845527

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19012s0001 0.5kb upstream 0.5kb upstream 2173 true Scaffold19012: 3718-5890 Arabidopsis halleri
Araha.19012s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold19012: 5391-5890 Arabidopsis halleri
Araha.19012s0001 0.5kb downstream 0.5kb downstream 2173 true Scaffold19012: 3218-5390 Arabidopsis halleri
Araha.19012s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold19012: 3218-3717 Arabidopsis halleri
Araha.19012s0001 1.0kb upstream 1.0kb upstream 2673 true Scaffold19012: 3718-6390 Arabidopsis halleri
Araha.19012s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold19012: 5391-6390 Arabidopsis halleri
Araha.19012s0001 1.0kb downstream 1.0kb downstream 2673 true Scaffold19012: 2718-5390 Arabidopsis halleri
Araha.19012s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold19012: 2718-3717 Arabidopsis halleri
Araha.19012s0001 2.0kb upstream 2.0kb upstream 3673 true Scaffold19012: 3718-7390 Arabidopsis halleri
Araha.19012s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold19012: 5391-7390 Arabidopsis halleri
Araha.19012s0001 2.0kb downstream 2.0kb downstream 3673 true Scaffold19012: 1718-5390 Arabidopsis halleri
Araha.19012s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold19012: 1718-3717 Arabidopsis halleri
Araha.19012s0001 5.0kb upstream 5.0kb upstream 6673 true Scaffold19012: 3718-10390 Arabidopsis halleri
Araha.19012s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold19012: 5391-10390 Arabidopsis halleri
Araha.19012s0001 5.0kb downstream 5.0kb downstream 5390 true Scaffold19012: 1-5390 Arabidopsis halleri
Araha.19012s0001 5.0kb downstream 5.0kb downstream 3717 false Scaffold19012: 1-3717 Arabidopsis halleri
Araha.19012s0001 10.0kb upstream 10.0kb upstream 11673 true Scaffold19012: 3718-15390 Arabidopsis halleri
Araha.19012s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold19012: 5391-15390 Arabidopsis halleri
Araha.19012s0001 10.0kb downstream 10.0kb downstream 5390 true Scaffold19012: 1-5390 Arabidopsis halleri
Araha.19012s0001 10.0kb downstream 10.0kb downstream 3717 false Scaffold19012: 1-3717 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378206 5261 Brassicaceae View MSA
123834577 5264 Brassicales-Malvales View MSA
124344793 5266 SBM View MSA
124252340 5268 Malvidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain