Gene : Araha.19350s0010 A. halleri v1.1
Defline:  (1 of 3) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  10
Name:  ? Araha.19350s0010 Secondary Identifier:  ? PAC:28852049
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ARGSYNBSUB-PWY Arabidopsis halleri pathologic  
Ahalleri ARGSYN-PWY Arabidopsis halleri pathologic  
Ahalleri CITRULBIO-PWY Arabidopsis halleri pathologic  
Ahalleri CITRULLINE-DEG-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-4984 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19350s0010 0.5kb upstream 0.5kb upstream 2793 true Scaffold19350: 37561-40353 Arabidopsis halleri
Araha.19350s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold19350: 39854-40353 Arabidopsis halleri
Araha.19350s0010 0.5kb downstream 0.5kb downstream 2793 true Scaffold19350: 37061-39853 Arabidopsis halleri
Araha.19350s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold19350: 37061-37560 Arabidopsis halleri
Araha.19350s0010 1.0kb upstream 1.0kb upstream 3293 true Scaffold19350: 37561-40853 Arabidopsis halleri
Araha.19350s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold19350: 39854-40853 Arabidopsis halleri
Araha.19350s0010 1.0kb downstream 1.0kb downstream 3293 true Scaffold19350: 36561-39853 Arabidopsis halleri
Araha.19350s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold19350: 36561-37560 Arabidopsis halleri
Araha.19350s0010 2.0kb upstream 2.0kb upstream 4293 true Scaffold19350: 37561-41853 Arabidopsis halleri
Araha.19350s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold19350: 39854-41853 Arabidopsis halleri
Araha.19350s0010 2.0kb downstream 2.0kb downstream 4293 true Scaffold19350: 35561-39853 Arabidopsis halleri
Araha.19350s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold19350: 35561-37560 Arabidopsis halleri
Araha.19350s0010 5.0kb upstream 5.0kb upstream 7293 true Scaffold19350: 37561-44853 Arabidopsis halleri
Araha.19350s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold19350: 39854-44853 Arabidopsis halleri
Araha.19350s0010 5.0kb downstream 5.0kb downstream 7293 true Scaffold19350: 32561-39853 Arabidopsis halleri
Araha.19350s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold19350: 32561-37560 Arabidopsis halleri
Araha.19350s0010 10.0kb upstream 10.0kb upstream 12293 true Scaffold19350: 37561-49853 Arabidopsis halleri
Araha.19350s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold19350: 39854-49853 Arabidopsis halleri
Araha.19350s0010 10.0kb downstream 10.0kb downstream 12293 true Scaffold19350: 27561-39853 Arabidopsis halleri
Araha.19350s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold19350: 27561-37560 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365362 5261 Brassicaceae View MSA
123830074 5264 Brassicales-Malvales View MSA
124343183 5266 SBM View MSA
124239745 5268 Malvidae View MSA
124068629 5270 Rosid View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain