Gene : Araha.19188s0003 A. halleri v1.1

Defline:  (1 of 12) PF07714//PF08263//PF13855 - Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  3
Name:  ? Araha.19188s0003 Secondary Identifier:  ? PAC:28840243

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19188s0003 0.5kb upstream 0.5kb upstream 4935 true Scaffold19188: 8472-13406 Arabidopsis halleri
Araha.19188s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold19188: 8472-8971 Arabidopsis halleri
Araha.19188s0003 0.5kb downstream 0.5kb downstream 4935 true Scaffold19188: 8972-13906 Arabidopsis halleri
Araha.19188s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold19188: 13407-13906 Arabidopsis halleri
Araha.19188s0003 1.0kb upstream 1.0kb upstream 5435 true Scaffold19188: 7972-13406 Arabidopsis halleri
Araha.19188s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold19188: 7972-8971 Arabidopsis halleri
Araha.19188s0003 1.0kb downstream 1.0kb downstream 5435 true Scaffold19188: 8972-14406 Arabidopsis halleri
Araha.19188s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold19188: 13407-14406 Arabidopsis halleri
Araha.19188s0003 2.0kb upstream 2.0kb upstream 6435 true Scaffold19188: 6972-13406 Arabidopsis halleri
Araha.19188s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold19188: 6972-8971 Arabidopsis halleri
Araha.19188s0003 2.0kb downstream 2.0kb downstream 6435 true Scaffold19188: 8972-15406 Arabidopsis halleri
Araha.19188s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold19188: 13407-15406 Arabidopsis halleri
Araha.19188s0003 5.0kb upstream 5.0kb upstream 9435 true Scaffold19188: 3972-13406 Arabidopsis halleri
Araha.19188s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold19188: 3972-8971 Arabidopsis halleri
Araha.19188s0003 5.0kb downstream 5.0kb downstream 9435 true Scaffold19188: 8972-18406 Arabidopsis halleri
Araha.19188s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold19188: 13407-18406 Arabidopsis halleri
Araha.19188s0003 10.0kb upstream 10.0kb upstream 13406 true Scaffold19188: 1-13406 Arabidopsis halleri
Araha.19188s0003 10.0kb upstream 10.0kb upstream 8971 false Scaffold19188: 1-8971 Arabidopsis halleri
Araha.19188s0003 10.0kb downstream 10.0kb downstream 14435 true Scaffold19188: 8972-23406 Arabidopsis halleri
Araha.19188s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold19188: 13407-23406 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369775 5261 Brassicaceae View MSA
123838232 5264 Brassicales-Malvales View MSA
124350198 5266 SBM View MSA
124238065 5268 Malvidae View MSA
124065018 5270 Rosid View MSA
123737395 5271 Pentapetalae View MSA
122789526 5272 Eudicot View MSA
122050311 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain