Gene : Araha.7438s0009 A. halleri v1.1
Defline:  (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  9
Name:  ? Araha.7438s0009 Secondary Identifier:  ? PAC:28847621
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7438s0009 0.5kb upstream 0.5kb upstream 3518 true Scaffold7438: 26022-29539 Arabidopsis halleri
Araha.7438s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold7438: 29040-29539 Arabidopsis halleri
Araha.7438s0009 0.5kb downstream 0.5kb downstream 3518 true Scaffold7438: 25522-29039 Arabidopsis halleri
Araha.7438s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold7438: 25522-26021 Arabidopsis halleri
Araha.7438s0009 1.0kb upstream 1.0kb upstream 4018 true Scaffold7438: 26022-30039 Arabidopsis halleri
Araha.7438s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold7438: 29040-30039 Arabidopsis halleri
Araha.7438s0009 1.0kb downstream 1.0kb downstream 4018 true Scaffold7438: 25022-29039 Arabidopsis halleri
Araha.7438s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold7438: 25022-26021 Arabidopsis halleri
Araha.7438s0009 2.0kb upstream 2.0kb upstream 5018 true Scaffold7438: 26022-31039 Arabidopsis halleri
Araha.7438s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold7438: 29040-31039 Arabidopsis halleri
Araha.7438s0009 2.0kb downstream 2.0kb downstream 5018 true Scaffold7438: 24022-29039 Arabidopsis halleri
Araha.7438s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold7438: 24022-26021 Arabidopsis halleri
Araha.7438s0009 5.0kb upstream 5.0kb upstream 7385 true Scaffold7438: 26022-33406 Arabidopsis halleri
Araha.7438s0009 5.0kb upstream 5.0kb upstream 4367 false Scaffold7438: 29040-33406 Arabidopsis halleri
Araha.7438s0009 5.0kb downstream 5.0kb downstream 8018 true Scaffold7438: 21022-29039 Arabidopsis halleri
Araha.7438s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold7438: 21022-26021 Arabidopsis halleri
Araha.7438s0009 10.0kb upstream 10.0kb upstream 7385 true Scaffold7438: 26022-33406 Arabidopsis halleri
Araha.7438s0009 10.0kb upstream 10.0kb upstream 4367 false Scaffold7438: 29040-33406 Arabidopsis halleri
Araha.7438s0009 10.0kb downstream 10.0kb downstream 13018 true Scaffold7438: 16022-29039 Arabidopsis halleri
Araha.7438s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold7438: 16022-26021 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375440 5261 Brassicaceae View MSA
123800955 5264 Brassicales-Malvales View MSA
124298307 5266 SBM View MSA
124149979 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain