Gene : Araha.20031s0001 A. halleri v1.1
Defline:  (1 of 6) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  1
Name:  ? Araha.20031s0001 Secondary Identifier:  ? PAC:28839558
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri BRANCHED-CHAIN-AA-SYN-PWY Arabidopsis halleri pathologic  
Ahalleri LEUSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20031s0001 0.5kb upstream 0.5kb upstream 4725 true Scaffold20031: 1404-6128 Arabidopsis halleri
Araha.20031s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold20031: 1404-1903 Arabidopsis halleri
Araha.20031s0001 0.5kb downstream 0.5kb downstream 4725 true Scaffold20031: 1904-6628 Arabidopsis halleri
Araha.20031s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold20031: 6129-6628 Arabidopsis halleri
Araha.20031s0001 1.0kb upstream 1.0kb upstream 5225 true Scaffold20031: 904-6128 Arabidopsis halleri
Araha.20031s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold20031: 904-1903 Arabidopsis halleri
Araha.20031s0001 1.0kb downstream 1.0kb downstream 5225 true Scaffold20031: 1904-7128 Arabidopsis halleri
Araha.20031s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold20031: 6129-7128 Arabidopsis halleri
Araha.20031s0001 2.0kb upstream 2.0kb upstream 6128 true Scaffold20031: 1-6128 Arabidopsis halleri
Araha.20031s0001 2.0kb upstream 2.0kb upstream 1903 false Scaffold20031: 1-1903 Arabidopsis halleri
Araha.20031s0001 2.0kb downstream 2.0kb downstream 6225 true Scaffold20031: 1904-8128 Arabidopsis halleri
Araha.20031s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold20031: 6129-8128 Arabidopsis halleri
Araha.20031s0001 5.0kb upstream 5.0kb upstream 6128 true Scaffold20031: 1-6128 Arabidopsis halleri
Araha.20031s0001 5.0kb upstream 5.0kb upstream 1903 false Scaffold20031: 1-1903 Arabidopsis halleri
Araha.20031s0001 5.0kb downstream 5.0kb downstream 9225 true Scaffold20031: 1904-11128 Arabidopsis halleri
Araha.20031s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold20031: 6129-11128 Arabidopsis halleri
Araha.20031s0001 10.0kb upstream 10.0kb upstream 6128 true Scaffold20031: 1-6128 Arabidopsis halleri
Araha.20031s0001 10.0kb upstream 10.0kb upstream 1903 false Scaffold20031: 1-1903 Arabidopsis halleri
Araha.20031s0001 10.0kb downstream 10.0kb downstream 11859 true Scaffold20031: 1904-13762 Arabidopsis halleri
Araha.20031s0001 10.0kb downstream 10.0kb downstream 7634 false Scaffold20031: 6129-13762 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376626 5261 Brassicaceae View MSA
123838353 5264 Brassicales-Malvales View MSA
124346473 5266 SBM View MSA
124238803 5268 Malvidae View MSA
124064281 5270 Rosid View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain