Gene : Araha.19953s0004 A. halleri v1.1
Defline:  (1 of 3) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  4
Name:  ? Araha.19953s0004 Secondary Identifier:  ? PAC:28845342
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CALVIN-PWY Arabidopsis halleri pathologic  
Ahalleri PHOTOALL-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-5723 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19953s0004 0.5kb upstream 0.5kb upstream 1424 true Scaffold19953: 13901-15324 Arabidopsis halleri
Araha.19953s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold19953: 13901-14400 Arabidopsis halleri
Araha.19953s0004 0.5kb downstream 0.5kb downstream 1424 true Scaffold19953: 14401-15824 Arabidopsis halleri
Araha.19953s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold19953: 15325-15824 Arabidopsis halleri
Araha.19953s0004 1.0kb upstream 1.0kb upstream 1924 true Scaffold19953: 13401-15324 Arabidopsis halleri
Araha.19953s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold19953: 13401-14400 Arabidopsis halleri
Araha.19953s0004 1.0kb downstream 1.0kb downstream 1924 true Scaffold19953: 14401-16324 Arabidopsis halleri
Araha.19953s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold19953: 15325-16324 Arabidopsis halleri
Araha.19953s0004 2.0kb upstream 2.0kb upstream 2924 true Scaffold19953: 12401-15324 Arabidopsis halleri
Araha.19953s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold19953: 12401-14400 Arabidopsis halleri
Araha.19953s0004 2.0kb downstream 2.0kb downstream 2924 true Scaffold19953: 14401-17324 Arabidopsis halleri
Araha.19953s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold19953: 15325-17324 Arabidopsis halleri
Araha.19953s0004 5.0kb upstream 5.0kb upstream 5924 true Scaffold19953: 9401-15324 Arabidopsis halleri
Araha.19953s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold19953: 9401-14400 Arabidopsis halleri
Araha.19953s0004 5.0kb downstream 5.0kb downstream 5924 true Scaffold19953: 14401-20324 Arabidopsis halleri
Araha.19953s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold19953: 15325-20324 Arabidopsis halleri
Araha.19953s0004 10.0kb upstream 10.0kb upstream 10924 true Scaffold19953: 4401-15324 Arabidopsis halleri
Araha.19953s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold19953: 4401-14400 Arabidopsis halleri
Araha.19953s0004 10.0kb downstream 10.0kb downstream 10924 true Scaffold19953: 14401-25324 Arabidopsis halleri
Araha.19953s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold19953: 15325-25324 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain