Gene : Araha.20324s0002 A. halleri v1.1
Defline:  (1 of 1) 4.2.3.105//4.2.3.46 - Alpha-farnesene synthase / AFS1 Genomic Order:  2
Name:  ? Araha.20324s0002 Secondary Identifier:  ? PAC:28837739
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5725 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20324s0002 0.5kb upstream 0.5kb upstream 3521 true Scaffold20324: 5746-9266 Arabidopsis halleri
Araha.20324s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold20324: 8767-9266 Arabidopsis halleri
Araha.20324s0002 0.5kb downstream 0.5kb downstream 3521 true Scaffold20324: 5246-8766 Arabidopsis halleri
Araha.20324s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold20324: 5246-5745 Arabidopsis halleri
Araha.20324s0002 1.0kb upstream 1.0kb upstream 4021 true Scaffold20324: 5746-9766 Arabidopsis halleri
Araha.20324s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold20324: 8767-9766 Arabidopsis halleri
Araha.20324s0002 1.0kb downstream 1.0kb downstream 4021 true Scaffold20324: 4746-8766 Arabidopsis halleri
Araha.20324s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold20324: 4746-5745 Arabidopsis halleri
Araha.20324s0002 2.0kb upstream 2.0kb upstream 4519 true Scaffold20324: 5746-10264 Arabidopsis halleri
Araha.20324s0002 2.0kb upstream 2.0kb upstream 1498 false Scaffold20324: 8767-10264 Arabidopsis halleri
Araha.20324s0002 2.0kb downstream 2.0kb downstream 5021 true Scaffold20324: 3746-8766 Arabidopsis halleri
Araha.20324s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold20324: 3746-5745 Arabidopsis halleri
Araha.20324s0002 5.0kb upstream 5.0kb upstream 4519 true Scaffold20324: 5746-10264 Arabidopsis halleri
Araha.20324s0002 5.0kb upstream 5.0kb upstream 1498 false Scaffold20324: 8767-10264 Arabidopsis halleri
Araha.20324s0002 5.0kb downstream 5.0kb downstream 8021 true Scaffold20324: 746-8766 Arabidopsis halleri
Araha.20324s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold20324: 746-5745 Arabidopsis halleri
Araha.20324s0002 10.0kb upstream 10.0kb upstream 4519 true Scaffold20324: 5746-10264 Arabidopsis halleri
Araha.20324s0002 10.0kb upstream 10.0kb upstream 1498 false Scaffold20324: 8767-10264 Arabidopsis halleri
Araha.20324s0002 10.0kb downstream 10.0kb downstream 8766 true Scaffold20324: 1-8766 Arabidopsis halleri
Araha.20324s0002 10.0kb downstream 10.0kb downstream 5745 false Scaffold20324: 1-5745 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367932 5261 Brassicaceae View MSA
123799450 5264 Brassicales-Malvales View MSA
124348177 5266 SBM View MSA
124254018 5268 Malvidae View MSA
124074530 5270 Rosid View MSA
123753426 5271 Pentapetalae View MSA
122797901 5272 Eudicot View MSA
122051661 5273 Angiosperm View MSA
121351720 5274 Embryophyte View MSA
123382290 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain