Gene : Araha.7513s0018 A. halleri v1.1

Defline:  (1 of 2) PTHR11952//PTHR11952:SF13 - UDP- GLUCOSE PYROPHOSPHORYLASE Genomic Order:  18
Name:  ? Araha.7513s0018 Secondary Identifier:  ? PAC:28861094

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3801 Arabidopsis halleri pathologic  
Ahalleri PWY-6527 Arabidopsis halleri pathologic  
Ahalleri PWY-7238 Arabidopsis halleri pathologic  
Ahalleri PWY-7343 Arabidopsis halleri pathologic  
Ahalleri SUCSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7513s0018 0.5kb upstream 0.5kb upstream 5396 true Scaffold7513: 58277-63672 Arabidopsis halleri
Araha.7513s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold7513: 63173-63672 Arabidopsis halleri
Araha.7513s0018 0.5kb downstream 0.5kb downstream 5396 true Scaffold7513: 57777-63172 Arabidopsis halleri
Araha.7513s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold7513: 57777-58276 Arabidopsis halleri
Araha.7513s0018 1.0kb upstream 1.0kb upstream 5896 true Scaffold7513: 58277-64172 Arabidopsis halleri
Araha.7513s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold7513: 63173-64172 Arabidopsis halleri
Araha.7513s0018 1.0kb downstream 1.0kb downstream 5896 true Scaffold7513: 57277-63172 Arabidopsis halleri
Araha.7513s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold7513: 57277-58276 Arabidopsis halleri
Araha.7513s0018 2.0kb upstream 2.0kb upstream 6896 true Scaffold7513: 58277-65172 Arabidopsis halleri
Araha.7513s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold7513: 63173-65172 Arabidopsis halleri
Araha.7513s0018 2.0kb downstream 2.0kb downstream 6896 true Scaffold7513: 56277-63172 Arabidopsis halleri
Araha.7513s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold7513: 56277-58276 Arabidopsis halleri
Araha.7513s0018 5.0kb upstream 5.0kb upstream 9896 true Scaffold7513: 58277-68172 Arabidopsis halleri
Araha.7513s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold7513: 63173-68172 Arabidopsis halleri
Araha.7513s0018 5.0kb downstream 5.0kb downstream 9896 true Scaffold7513: 53277-63172 Arabidopsis halleri
Araha.7513s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold7513: 53277-58276 Arabidopsis halleri
Araha.7513s0018 10.0kb upstream 10.0kb upstream 12482 true Scaffold7513: 58277-70758 Arabidopsis halleri
Araha.7513s0018 10.0kb upstream 10.0kb upstream 7586 false Scaffold7513: 63173-70758 Arabidopsis halleri
Araha.7513s0018 10.0kb downstream 10.0kb downstream 14896 true Scaffold7513: 48277-63172 Arabidopsis halleri
Araha.7513s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold7513: 48277-58276 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376894 5261 Brassicaceae View MSA
123829037 5264 Brassicales-Malvales View MSA
124340110 5266 SBM View MSA
124249882 5268 Malvidae View MSA
124061819 5270 Rosid View MSA
123737319 5271 Pentapetalae View MSA
122787504 5272 Eudicot View MSA
122045529 5273 Angiosperm View MSA
121350801 5274 Embryophyte View MSA
123428020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain