Gene : Araha.20073s0005 A. halleri v1.1
Defline:  (1 of 3) PTHR11751:SF411 - AMINOTRANSFERASE ACS10-RELATED Genomic Order:  5
Name:  ? Araha.20073s0005 Secondary Identifier:  ? PAC:28843655
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ASPARTATE-DEG1-PWY Arabidopsis halleri pathologic  
Ahalleri ASPARTATESYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3001 Arabidopsis halleri pathologic  
Ahalleri PWY-7115 Arabidopsis halleri pathologic  
Ahalleri PWY-7117 Arabidopsis halleri pathologic  
Ahalleri THRESYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20073s0005 0.5kb upstream 0.5kb upstream 3376 true Scaffold20073: 14626-18001 Arabidopsis halleri
Araha.20073s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold20073: 14626-15125 Arabidopsis halleri
Araha.20073s0005 0.5kb downstream 0.5kb downstream 3376 true Scaffold20073: 15126-18501 Arabidopsis halleri
Araha.20073s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold20073: 18002-18501 Arabidopsis halleri
Araha.20073s0005 1.0kb upstream 1.0kb upstream 3876 true Scaffold20073: 14126-18001 Arabidopsis halleri
Araha.20073s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold20073: 14126-15125 Arabidopsis halleri
Araha.20073s0005 1.0kb downstream 1.0kb downstream 3876 true Scaffold20073: 15126-19001 Arabidopsis halleri
Araha.20073s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold20073: 18002-19001 Arabidopsis halleri
Araha.20073s0005 2.0kb upstream 2.0kb upstream 4876 true Scaffold20073: 13126-18001 Arabidopsis halleri
Araha.20073s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold20073: 13126-15125 Arabidopsis halleri
Araha.20073s0005 2.0kb downstream 2.0kb downstream 4876 true Scaffold20073: 15126-20001 Arabidopsis halleri
Araha.20073s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold20073: 18002-20001 Arabidopsis halleri
Araha.20073s0005 5.0kb upstream 5.0kb upstream 7876 true Scaffold20073: 10126-18001 Arabidopsis halleri
Araha.20073s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold20073: 10126-15125 Arabidopsis halleri
Araha.20073s0005 5.0kb downstream 5.0kb downstream 7876 true Scaffold20073: 15126-23001 Arabidopsis halleri
Araha.20073s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold20073: 18002-23001 Arabidopsis halleri
Araha.20073s0005 10.0kb upstream 10.0kb upstream 12876 true Scaffold20073: 5126-18001 Arabidopsis halleri
Araha.20073s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold20073: 5126-15125 Arabidopsis halleri
Araha.20073s0005 10.0kb downstream 10.0kb downstream 12876 true Scaffold20073: 15126-28001 Arabidopsis halleri
Araha.20073s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold20073: 18002-28001 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121484357 5273 Angiosperm Singleton cluster - no MSA
122318072 5261 Brassicaceae Singleton cluster - no MSA
123759672 5264 Brassicales-Malvales Singleton cluster - no MSA
124258307 5266 SBM Singleton cluster - no MSA
124114930 5268 Malvidae Singleton cluster - no MSA
123844322 5270 Rosid Singleton cluster - no MSA
123430605 5271 Pentapetalae Singleton cluster - no MSA
122466226 5272 Eudicot Singleton cluster - no MSA
120757752 5274 Embryophyte Singleton cluster - no MSA
122800212 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain