Gene : Araha.19449s0004 A. halleri v1.1

Defline:  (1 of 1) PTHR28039:SF6 - ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 18, MITOCHONDRIAL-RELATED Genomic Order:  4
Name:  ? Araha.19449s0004 Secondary Identifier:  ? PAC:28862318

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY1F-FLAVSYN Arabidopsis halleri pathologic  
Ahalleri PWY-5059 Arabidopsis halleri pathologic  
Ahalleri PWY-6787 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19449s0004 0.5kb upstream 0.5kb upstream 1940 true Scaffold19449: 8354-10293 Arabidopsis halleri
Araha.19449s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold19449: 8354-8853 Arabidopsis halleri
Araha.19449s0004 0.5kb downstream 0.5kb downstream 1940 true Scaffold19449: 8854-10793 Arabidopsis halleri
Araha.19449s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold19449: 10294-10793 Arabidopsis halleri
Araha.19449s0004 1.0kb upstream 1.0kb upstream 2440 true Scaffold19449: 7854-10293 Arabidopsis halleri
Araha.19449s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold19449: 7854-8853 Arabidopsis halleri
Araha.19449s0004 1.0kb downstream 1.0kb downstream 2440 true Scaffold19449: 8854-11293 Arabidopsis halleri
Araha.19449s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold19449: 10294-11293 Arabidopsis halleri
Araha.19449s0004 2.0kb upstream 2.0kb upstream 3440 true Scaffold19449: 6854-10293 Arabidopsis halleri
Araha.19449s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold19449: 6854-8853 Arabidopsis halleri
Araha.19449s0004 2.0kb downstream 2.0kb downstream 3440 true Scaffold19449: 8854-12293 Arabidopsis halleri
Araha.19449s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold19449: 10294-12293 Arabidopsis halleri
Araha.19449s0004 5.0kb upstream 5.0kb upstream 6440 true Scaffold19449: 3854-10293 Arabidopsis halleri
Araha.19449s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold19449: 3854-8853 Arabidopsis halleri
Araha.19449s0004 5.0kb downstream 5.0kb downstream 6440 true Scaffold19449: 8854-15293 Arabidopsis halleri
Araha.19449s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold19449: 10294-15293 Arabidopsis halleri
Araha.19449s0004 10.0kb upstream 10.0kb upstream 10293 true Scaffold19449: 1-10293 Arabidopsis halleri
Araha.19449s0004 10.0kb upstream 10.0kb upstream 8853 false Scaffold19449: 1-8853 Arabidopsis halleri
Araha.19449s0004 10.0kb downstream 10.0kb downstream 11440 true Scaffold19449: 8854-20293 Arabidopsis halleri
Araha.19449s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold19449: 10294-20293 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368031 5261 Brassicaceae View MSA
123829937 5264 Brassicales-Malvales View MSA
124338750 5266 SBM View MSA
124250192 5268 Malvidae View MSA
124063090 5270 Rosid View MSA
123738535 5271 Pentapetalae View MSA
122786732 5272 Eudicot View MSA
122050313 5273 Angiosperm View MSA
121351129 5274 Embryophyte View MSA
123427502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain