Gene : Araha.19794s0002 A. halleri v1.1

Defline:  (1 of 2) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED Genomic Order:  2
Name:  ? Araha.19794s0002 Secondary Identifier:  ? PAC:28848407

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19794s0002 0.5kb upstream 0.5kb upstream 4255 true Scaffold19794: 2330-6584 Arabidopsis halleri
Araha.19794s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold19794: 2330-2829 Arabidopsis halleri
Araha.19794s0002 0.5kb downstream 0.5kb downstream 4255 true Scaffold19794: 2830-7084 Arabidopsis halleri
Araha.19794s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold19794: 6585-7084 Arabidopsis halleri
Araha.19794s0002 1.0kb upstream 1.0kb upstream 4755 true Scaffold19794: 1830-6584 Arabidopsis halleri
Araha.19794s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold19794: 1830-2829 Arabidopsis halleri
Araha.19794s0002 1.0kb downstream 1.0kb downstream 4755 true Scaffold19794: 2830-7584 Arabidopsis halleri
Araha.19794s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold19794: 6585-7584 Arabidopsis halleri
Araha.19794s0002 2.0kb upstream 2.0kb upstream 5755 true Scaffold19794: 830-6584 Arabidopsis halleri
Araha.19794s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold19794: 830-2829 Arabidopsis halleri
Araha.19794s0002 2.0kb downstream 2.0kb downstream 5755 true Scaffold19794: 2830-8584 Arabidopsis halleri
Araha.19794s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold19794: 6585-8584 Arabidopsis halleri
Araha.19794s0002 5.0kb upstream 5.0kb upstream 6584 true Scaffold19794: 1-6584 Arabidopsis halleri
Araha.19794s0002 5.0kb upstream 5.0kb upstream 2829 false Scaffold19794: 1-2829 Arabidopsis halleri
Araha.19794s0002 5.0kb downstream 5.0kb downstream 8755 true Scaffold19794: 2830-11584 Arabidopsis halleri
Araha.19794s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold19794: 6585-11584 Arabidopsis halleri
Araha.19794s0002 10.0kb upstream 10.0kb upstream 6584 true Scaffold19794: 1-6584 Arabidopsis halleri
Araha.19794s0002 10.0kb upstream 10.0kb upstream 2829 false Scaffold19794: 1-2829 Arabidopsis halleri
Araha.19794s0002 10.0kb downstream 10.0kb downstream 8872 true Scaffold19794: 2830-11701 Arabidopsis halleri
Araha.19794s0002 10.0kb downstream 10.0kb downstream 5117 false Scaffold19794: 6585-11701 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371538 5261 Brassicaceae View MSA
123800182 5264 Brassicales-Malvales View MSA
124297627 5266 SBM View MSA
124244823 5268 Malvidae View MSA
124064324 5270 Rosid View MSA
123739287 5271 Pentapetalae View MSA
122793193 5272 Eudicot View MSA
122049253 5273 Angiosperm View MSA
121346683 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain