Gene : Araha.19708s0003 A. halleri v1.1
Defline:  (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase Genomic Order:  3
Name:  ? Araha.19708s0003 Secondary Identifier:  ? PAC:28859971
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri LEU-DEG2-PWY Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19708s0003 0.5kb upstream 0.5kb upstream 4166 true Scaffold19708: 18307-22472 Arabidopsis halleri
Araha.19708s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold19708: 18307-18806 Arabidopsis halleri
Araha.19708s0003 0.5kb downstream 0.5kb downstream 4166 true Scaffold19708: 18807-22972 Arabidopsis halleri
Araha.19708s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold19708: 22473-22972 Arabidopsis halleri
Araha.19708s0003 1.0kb upstream 1.0kb upstream 4666 true Scaffold19708: 17807-22472 Arabidopsis halleri
Araha.19708s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold19708: 17807-18806 Arabidopsis halleri
Araha.19708s0003 1.0kb downstream 1.0kb downstream 4666 true Scaffold19708: 18807-23472 Arabidopsis halleri
Araha.19708s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold19708: 22473-23472 Arabidopsis halleri
Araha.19708s0003 2.0kb upstream 2.0kb upstream 5666 true Scaffold19708: 16807-22472 Arabidopsis halleri
Araha.19708s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold19708: 16807-18806 Arabidopsis halleri
Araha.19708s0003 2.0kb downstream 2.0kb downstream 5666 true Scaffold19708: 18807-24472 Arabidopsis halleri
Araha.19708s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold19708: 22473-24472 Arabidopsis halleri
Araha.19708s0003 5.0kb upstream 5.0kb upstream 8666 true Scaffold19708: 13807-22472 Arabidopsis halleri
Araha.19708s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold19708: 13807-18806 Arabidopsis halleri
Araha.19708s0003 5.0kb downstream 5.0kb downstream 8492 true Scaffold19708: 18807-27298 Arabidopsis halleri
Araha.19708s0003 5.0kb downstream 5.0kb downstream 4826 false Scaffold19708: 22473-27298 Arabidopsis halleri
Araha.19708s0003 10.0kb upstream 10.0kb upstream 13666 true Scaffold19708: 8807-22472 Arabidopsis halleri
Araha.19708s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold19708: 8807-18806 Arabidopsis halleri
Araha.19708s0003 10.0kb downstream 10.0kb downstream 8492 true Scaffold19708: 18807-27298 Arabidopsis halleri
Araha.19708s0003 10.0kb downstream 10.0kb downstream 4826 false Scaffold19708: 22473-27298 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364667 5261 Brassicaceae View MSA
123834510 5264 Brassicales-Malvales View MSA
124345181 5266 SBM View MSA
124245610 5268 Malvidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain