Gene : Araha.7505s0003 A. halleri v1.1

Defline:  (1 of 4) PF06232 - Embryo-specific protein 3, (ATS3) (ATS3) Genomic Order:  3
Name:  ? Araha.7505s0003 Secondary Identifier:  ? PAC:28852739

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7505s0003 0.5kb upstream 0.5kb upstream 1550 true Scaffold7505: 5185-6734 Arabidopsis halleri
Araha.7505s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold7505: 6235-6734 Arabidopsis halleri
Araha.7505s0003 0.5kb downstream 0.5kb downstream 1550 true Scaffold7505: 4685-6234 Arabidopsis halleri
Araha.7505s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold7505: 4685-5184 Arabidopsis halleri
Araha.7505s0003 1.0kb upstream 1.0kb upstream 2050 true Scaffold7505: 5185-7234 Arabidopsis halleri
Araha.7505s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold7505: 6235-7234 Arabidopsis halleri
Araha.7505s0003 1.0kb downstream 1.0kb downstream 2050 true Scaffold7505: 4185-6234 Arabidopsis halleri
Araha.7505s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold7505: 4185-5184 Arabidopsis halleri
Araha.7505s0003 2.0kb upstream 2.0kb upstream 3050 true Scaffold7505: 5185-8234 Arabidopsis halleri
Araha.7505s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold7505: 6235-8234 Arabidopsis halleri
Araha.7505s0003 2.0kb downstream 2.0kb downstream 3050 true Scaffold7505: 3185-6234 Arabidopsis halleri
Araha.7505s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold7505: 3185-5184 Arabidopsis halleri
Araha.7505s0003 5.0kb upstream 5.0kb upstream 6050 true Scaffold7505: 5185-11234 Arabidopsis halleri
Araha.7505s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold7505: 6235-11234 Arabidopsis halleri
Araha.7505s0003 5.0kb downstream 5.0kb downstream 6050 true Scaffold7505: 185-6234 Arabidopsis halleri
Araha.7505s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold7505: 185-5184 Arabidopsis halleri
Araha.7505s0003 10.0kb upstream 10.0kb upstream 11050 true Scaffold7505: 5185-16234 Arabidopsis halleri
Araha.7505s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold7505: 6235-16234 Arabidopsis halleri
Araha.7505s0003 10.0kb downstream 10.0kb downstream 6234 true Scaffold7505: 1-6234 Arabidopsis halleri
Araha.7505s0003 10.0kb downstream 10.0kb downstream 5184 false Scaffold7505: 1-5184 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363608 5261 Brassicaceae View MSA
123839417 5264 Brassicales-Malvales View MSA
124347670 5266 SBM View MSA
124251056 5268 Malvidae View MSA
124070203 5270 Rosid View MSA
123746143 5271 Pentapetalae View MSA
122796857 5272 Eudicot View MSA
122048426 5273 Angiosperm View MSA
121310965 5274 Embryophyte View MSA
123348331 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain