Gene : Araha.20986s0001 A. halleri v1.1
Defline:  (1 of 4) PTHR31321:SF23 - PECTINESTERASE PPME1-RELATED Genomic Order:  1
Name:  ? Araha.20986s0001 Secondary Identifier:  ? PAC:28837777
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20986s0001 0.5kb upstream 0.5kb upstream 2053 true Scaffold20986: 465-2517 Arabidopsis halleri
Araha.20986s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold20986: 2018-2517 Arabidopsis halleri
Araha.20986s0001 0.5kb downstream 0.5kb downstream 2017 true Scaffold20986: 1-2017 Arabidopsis halleri
Araha.20986s0001 0.5kb downstream 0.5kb downstream 464 false Scaffold20986: 1-464 Arabidopsis halleri
Araha.20986s0001 1.0kb upstream 1.0kb upstream 2553 true Scaffold20986: 465-3017 Arabidopsis halleri
Araha.20986s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold20986: 2018-3017 Arabidopsis halleri
Araha.20986s0001 1.0kb downstream 1.0kb downstream 2017 true Scaffold20986: 1-2017 Arabidopsis halleri
Araha.20986s0001 1.0kb downstream 1.0kb downstream 464 false Scaffold20986: 1-464 Arabidopsis halleri
Araha.20986s0001 2.0kb upstream 2.0kb upstream 3553 true Scaffold20986: 465-4017 Arabidopsis halleri
Araha.20986s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold20986: 2018-4017 Arabidopsis halleri
Araha.20986s0001 2.0kb downstream 2.0kb downstream 2017 true Scaffold20986: 1-2017 Arabidopsis halleri
Araha.20986s0001 2.0kb downstream 2.0kb downstream 464 false Scaffold20986: 1-464 Arabidopsis halleri
Araha.20986s0001 5.0kb upstream 5.0kb upstream 6553 true Scaffold20986: 465-7017 Arabidopsis halleri
Araha.20986s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold20986: 2018-7017 Arabidopsis halleri
Araha.20986s0001 5.0kb downstream 5.0kb downstream 2017 true Scaffold20986: 1-2017 Arabidopsis halleri
Araha.20986s0001 5.0kb downstream 5.0kb downstream 464 false Scaffold20986: 1-464 Arabidopsis halleri
Araha.20986s0001 10.0kb upstream 10.0kb upstream 11553 true Scaffold20986: 465-12017 Arabidopsis halleri
Araha.20986s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold20986: 2018-12017 Arabidopsis halleri
Araha.20986s0001 10.0kb downstream 10.0kb downstream 2017 true Scaffold20986: 1-2017 Arabidopsis halleri
Araha.20986s0001 10.0kb downstream 10.0kb downstream 464 false Scaffold20986: 1-464 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371294 5261 Brassicaceae View MSA
123836646 5264 Brassicales-Malvales View MSA
124350112 5266 SBM View MSA
124253324 5268 Malvidae View MSA
124071696 5270 Rosid View MSA
123740013 5271 Pentapetalae View MSA
122792940 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain