Gene : Araha.20861s0005 A. halleri v1.1

Defline:  (1 of 2) PTHR31499:SF2 - MYB FAMILY TRANSCRIPTION FACTOR APL Genomic Order:  5
Name:  ? Araha.20861s0005 Secondary Identifier:  ? PAC:28856876

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20861s0005 0.5kb upstream 0.5kb upstream 2399 true Scaffold20861: 19251-21649 Arabidopsis halleri
Araha.20861s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold20861: 19251-19750 Arabidopsis halleri
Araha.20861s0005 0.5kb downstream 0.5kb downstream 2399 true Scaffold20861: 19751-22149 Arabidopsis halleri
Araha.20861s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold20861: 21650-22149 Arabidopsis halleri
Araha.20861s0005 1.0kb upstream 1.0kb upstream 2899 true Scaffold20861: 18751-21649 Arabidopsis halleri
Araha.20861s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold20861: 18751-19750 Arabidopsis halleri
Araha.20861s0005 1.0kb downstream 1.0kb downstream 2899 true Scaffold20861: 19751-22649 Arabidopsis halleri
Araha.20861s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold20861: 21650-22649 Arabidopsis halleri
Araha.20861s0005 2.0kb upstream 2.0kb upstream 3899 true Scaffold20861: 17751-21649 Arabidopsis halleri
Araha.20861s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold20861: 17751-19750 Arabidopsis halleri
Araha.20861s0005 2.0kb downstream 2.0kb downstream 3899 true Scaffold20861: 19751-23649 Arabidopsis halleri
Araha.20861s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold20861: 21650-23649 Arabidopsis halleri
Araha.20861s0005 5.0kb upstream 5.0kb upstream 6899 true Scaffold20861: 14751-21649 Arabidopsis halleri
Araha.20861s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold20861: 14751-19750 Arabidopsis halleri
Araha.20861s0005 5.0kb downstream 5.0kb downstream 5076 true Scaffold20861: 19751-24826 Arabidopsis halleri
Araha.20861s0005 5.0kb downstream 5.0kb downstream 3177 false Scaffold20861: 21650-24826 Arabidopsis halleri
Araha.20861s0005 10.0kb upstream 10.0kb upstream 11899 true Scaffold20861: 9751-21649 Arabidopsis halleri
Araha.20861s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold20861: 9751-19750 Arabidopsis halleri
Araha.20861s0005 10.0kb downstream 10.0kb downstream 5076 true Scaffold20861: 19751-24826 Arabidopsis halleri
Araha.20861s0005 10.0kb downstream 10.0kb downstream 3177 false Scaffold20861: 21650-24826 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369878 5261 Brassicaceae View MSA
123834732 5264 Brassicales-Malvales View MSA
124340091 5266 SBM View MSA
124242043 5268 Malvidae View MSA
124061276 5270 Rosid View MSA
123738186 5271 Pentapetalae View MSA
122787106 5272 Eudicot View MSA
122046288 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain