Gene : Araha.20861s0004 A. halleri v1.1
Defline:  (1 of 1) PTHR11699:SF49 - SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  4
Name:  ? Araha.20861s0004 Secondary Identifier:  ? PAC:28856873
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLUDEG-I-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-4321 Arabidopsis halleri pathologic  
Ahalleri PWY-6473 Arabidopsis halleri pathologic  
Ahalleri PWY-6535 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20861s0004 0.5kb upstream 0.5kb upstream 5322 true Scaffold20861: 11288-16609 Arabidopsis halleri
Araha.20861s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold20861: 11288-11787 Arabidopsis halleri
Araha.20861s0004 0.5kb downstream 0.5kb downstream 5322 true Scaffold20861: 11788-17109 Arabidopsis halleri
Araha.20861s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold20861: 16610-17109 Arabidopsis halleri
Araha.20861s0004 1.0kb upstream 1.0kb upstream 5822 true Scaffold20861: 10788-16609 Arabidopsis halleri
Araha.20861s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold20861: 10788-11787 Arabidopsis halleri
Araha.20861s0004 1.0kb downstream 1.0kb downstream 5822 true Scaffold20861: 11788-17609 Arabidopsis halleri
Araha.20861s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold20861: 16610-17609 Arabidopsis halleri
Araha.20861s0004 2.0kb upstream 2.0kb upstream 6822 true Scaffold20861: 9788-16609 Arabidopsis halleri
Araha.20861s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold20861: 9788-11787 Arabidopsis halleri
Araha.20861s0004 2.0kb downstream 2.0kb downstream 6822 true Scaffold20861: 11788-18609 Arabidopsis halleri
Araha.20861s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold20861: 16610-18609 Arabidopsis halleri
Araha.20861s0004 5.0kb upstream 5.0kb upstream 9822 true Scaffold20861: 6788-16609 Arabidopsis halleri
Araha.20861s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold20861: 6788-11787 Arabidopsis halleri
Araha.20861s0004 5.0kb downstream 5.0kb downstream 9822 true Scaffold20861: 11788-21609 Arabidopsis halleri
Araha.20861s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold20861: 16610-21609 Arabidopsis halleri
Araha.20861s0004 10.0kb upstream 10.0kb upstream 14822 true Scaffold20861: 1788-16609 Arabidopsis halleri
Araha.20861s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold20861: 1788-11787 Arabidopsis halleri
Araha.20861s0004 10.0kb downstream 10.0kb downstream 13039 true Scaffold20861: 11788-24826 Arabidopsis halleri
Araha.20861s0004 10.0kb downstream 10.0kb downstream 8217 false Scaffold20861: 16610-24826 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373089 5261 Brassicaceae View MSA
123832522 5264 Brassicales-Malvales View MSA
124343757 5266 SBM View MSA
124242671 5268 Malvidae View MSA
124063190 5270 Rosid View MSA
123737868 5271 Pentapetalae View MSA
122769906 5272 Eudicot View MSA
122045886 5273 Angiosperm View MSA
121345720 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain