Gene : Araha.20846s0007 A. halleri v1.1

Defline:  (1 of 3) PTHR12758:SF20 - PEPTIDASE-C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  7
Name:  ? Araha.20846s0007 Secondary Identifier:  ? PAC:28847895

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20846s0007 0.5kb upstream 0.5kb upstream 5493 true Scaffold20846: 24607-30099 Arabidopsis halleri
Araha.20846s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold20846: 29600-30099 Arabidopsis halleri
Araha.20846s0007 0.5kb downstream 0.5kb downstream 5493 true Scaffold20846: 24107-29599 Arabidopsis halleri
Araha.20846s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold20846: 24107-24606 Arabidopsis halleri
Araha.20846s0007 1.0kb upstream 1.0kb upstream 5993 true Scaffold20846: 24607-30599 Arabidopsis halleri
Araha.20846s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold20846: 29600-30599 Arabidopsis halleri
Araha.20846s0007 1.0kb downstream 1.0kb downstream 5993 true Scaffold20846: 23607-29599 Arabidopsis halleri
Araha.20846s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold20846: 23607-24606 Arabidopsis halleri
Araha.20846s0007 2.0kb upstream 2.0kb upstream 6993 true Scaffold20846: 24607-31599 Arabidopsis halleri
Araha.20846s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold20846: 29600-31599 Arabidopsis halleri
Araha.20846s0007 2.0kb downstream 2.0kb downstream 6993 true Scaffold20846: 22607-29599 Arabidopsis halleri
Araha.20846s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold20846: 22607-24606 Arabidopsis halleri
Araha.20846s0007 5.0kb upstream 5.0kb upstream 9993 true Scaffold20846: 24607-34599 Arabidopsis halleri
Araha.20846s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold20846: 29600-34599 Arabidopsis halleri
Araha.20846s0007 5.0kb downstream 5.0kb downstream 9993 true Scaffold20846: 19607-29599 Arabidopsis halleri
Araha.20846s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold20846: 19607-24606 Arabidopsis halleri
Araha.20846s0007 10.0kb upstream 10.0kb upstream 14993 true Scaffold20846: 24607-39599 Arabidopsis halleri
Araha.20846s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold20846: 29600-39599 Arabidopsis halleri
Araha.20846s0007 10.0kb downstream 10.0kb downstream 14993 true Scaffold20846: 14607-29599 Arabidopsis halleri
Araha.20846s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold20846: 14607-24606 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376531 5261 Brassicaceae View MSA
123801279 5264 Brassicales-Malvales View MSA
124298601 5266 SBM View MSA
124251231 5268 Malvidae View MSA
124065428 5270 Rosid View MSA
123746895 5271 Pentapetalae View MSA
122790736 5272 Eudicot View MSA
122047754 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain