Gene : Araha.21176s0001 A. halleri v1.1
Defline:  (1 of 4) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  1
Name:  ? Araha.21176s0001 Secondary Identifier:  ? PAC:28849127
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYOXYLATE-BYPASS Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY-561 Arabidopsis halleri pathologic  
Ahalleri PWY-5690 Arabidopsis halleri pathologic  
Ahalleri PWY-6549 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.21176s0001 0.5kb upstream 0.5kb upstream 4867 true Scaffold21176: 1-4867 Arabidopsis halleri
Araha.21176s0001 0.5kb upstream 0.5kb upstream 45 false Scaffold21176: 1-45 Arabidopsis halleri
Araha.21176s0001 0.5kb downstream 0.5kb downstream 5322 true Scaffold21176: 46-5367 Arabidopsis halleri
Araha.21176s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold21176: 4868-5367 Arabidopsis halleri
Araha.21176s0001 1.0kb upstream 1.0kb upstream 4867 true Scaffold21176: 1-4867 Arabidopsis halleri
Araha.21176s0001 1.0kb upstream 1.0kb upstream 45 false Scaffold21176: 1-45 Arabidopsis halleri
Araha.21176s0001 1.0kb downstream 1.0kb downstream 5822 true Scaffold21176: 46-5867 Arabidopsis halleri
Araha.21176s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold21176: 4868-5867 Arabidopsis halleri
Araha.21176s0001 2.0kb upstream 2.0kb upstream 4867 true Scaffold21176: 1-4867 Arabidopsis halleri
Araha.21176s0001 2.0kb upstream 2.0kb upstream 45 false Scaffold21176: 1-45 Arabidopsis halleri
Araha.21176s0001 2.0kb downstream 2.0kb downstream 6822 true Scaffold21176: 46-6867 Arabidopsis halleri
Araha.21176s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold21176: 4868-6867 Arabidopsis halleri
Araha.21176s0001 5.0kb upstream 5.0kb upstream 4867 true Scaffold21176: 1-4867 Arabidopsis halleri
Araha.21176s0001 5.0kb upstream 5.0kb upstream 45 false Scaffold21176: 1-45 Arabidopsis halleri
Araha.21176s0001 5.0kb downstream 5.0kb downstream 9822 true Scaffold21176: 46-9867 Arabidopsis halleri
Araha.21176s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold21176: 4868-9867 Arabidopsis halleri
Araha.21176s0001 10.0kb upstream 10.0kb upstream 4867 true Scaffold21176: 1-4867 Arabidopsis halleri
Araha.21176s0001 10.0kb upstream 10.0kb upstream 45 false Scaffold21176: 1-45 Arabidopsis halleri
Araha.21176s0001 10.0kb downstream 10.0kb downstream 14822 true Scaffold21176: 46-14867 Arabidopsis halleri
Araha.21176s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold21176: 4868-14867 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374065 5261 Brassicaceae View MSA
123840370 5264 Brassicales-Malvales View MSA
124350117 5266 SBM View MSA
124253803 5268 Malvidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain