Gene : Araha.21152s0004 A. halleri v1.1
Defline:  (1 of 1) PTHR33222:SF9 - PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC Genomic Order:  4
Name:  ? Araha.21152s0004 Secondary Identifier:  ? PAC:28847982
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PHOTOALL-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-101 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.21152s0004 0.5kb upstream 0.5kb upstream 2036 true Scaffold21152: 9237-11272 Arabidopsis halleri
Araha.21152s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold21152: 10773-11272 Arabidopsis halleri
Araha.21152s0004 0.5kb downstream 0.5kb downstream 2036 true Scaffold21152: 8737-10772 Arabidopsis halleri
Araha.21152s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold21152: 8737-9236 Arabidopsis halleri
Araha.21152s0004 1.0kb upstream 1.0kb upstream 2536 true Scaffold21152: 9237-11772 Arabidopsis halleri
Araha.21152s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold21152: 10773-11772 Arabidopsis halleri
Araha.21152s0004 1.0kb downstream 1.0kb downstream 2536 true Scaffold21152: 8237-10772 Arabidopsis halleri
Araha.21152s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold21152: 8237-9236 Arabidopsis halleri
Araha.21152s0004 2.0kb upstream 2.0kb upstream 3536 true Scaffold21152: 9237-12772 Arabidopsis halleri
Araha.21152s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold21152: 10773-12772 Arabidopsis halleri
Araha.21152s0004 2.0kb downstream 2.0kb downstream 3536 true Scaffold21152: 7237-10772 Arabidopsis halleri
Araha.21152s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold21152: 7237-9236 Arabidopsis halleri
Araha.21152s0004 5.0kb upstream 5.0kb upstream 4002 true Scaffold21152: 9237-13238 Arabidopsis halleri
Araha.21152s0004 5.0kb upstream 5.0kb upstream 2466 false Scaffold21152: 10773-13238 Arabidopsis halleri
Araha.21152s0004 5.0kb downstream 5.0kb downstream 6536 true Scaffold21152: 4237-10772 Arabidopsis halleri
Araha.21152s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold21152: 4237-9236 Arabidopsis halleri
Araha.21152s0004 10.0kb upstream 10.0kb upstream 4002 true Scaffold21152: 9237-13238 Arabidopsis halleri
Araha.21152s0004 10.0kb upstream 10.0kb upstream 2466 false Scaffold21152: 10773-13238 Arabidopsis halleri
Araha.21152s0004 10.0kb downstream 10.0kb downstream 10772 true Scaffold21152: 1-10772 Arabidopsis halleri
Araha.21152s0004 10.0kb downstream 10.0kb downstream 9236 false Scaffold21152: 1-9236 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367981 5261 Brassicaceae View MSA
123829580 5264 Brassicales-Malvales View MSA
124343674 5266 SBM View MSA
124248900 5268 Malvidae View MSA
124068427 5270 Rosid View MSA
123747086 5271 Pentapetalae View MSA
122793406 5272 Eudicot View MSA
122042391 5273 Angiosperm View MSA
121347672 5274 Embryophyte View MSA
123425732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain