Gene : Araha.20560s0005 A. halleri v1.1

Defline:  (1 of 34) PF14365 - Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  5
Name:  ? Araha.20560s0005 Secondary Identifier:  ? PAC:28848664

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20560s0005 0.5kb upstream 0.5kb upstream 4369 true Scaffold20560: 8975-13343 Arabidopsis halleri
Araha.20560s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold20560: 12844-13343 Arabidopsis halleri
Araha.20560s0005 0.5kb downstream 0.5kb downstream 4369 true Scaffold20560: 8475-12843 Arabidopsis halleri
Araha.20560s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold20560: 8475-8974 Arabidopsis halleri
Araha.20560s0005 1.0kb upstream 1.0kb upstream 4869 true Scaffold20560: 8975-13843 Arabidopsis halleri
Araha.20560s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold20560: 12844-13843 Arabidopsis halleri
Araha.20560s0005 1.0kb downstream 1.0kb downstream 4869 true Scaffold20560: 7975-12843 Arabidopsis halleri
Araha.20560s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold20560: 7975-8974 Arabidopsis halleri
Araha.20560s0005 2.0kb upstream 2.0kb upstream 5869 true Scaffold20560: 8975-14843 Arabidopsis halleri
Araha.20560s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold20560: 12844-14843 Arabidopsis halleri
Araha.20560s0005 2.0kb downstream 2.0kb downstream 5869 true Scaffold20560: 6975-12843 Arabidopsis halleri
Araha.20560s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold20560: 6975-8974 Arabidopsis halleri
Araha.20560s0005 5.0kb upstream 5.0kb upstream 8869 true Scaffold20560: 8975-17843 Arabidopsis halleri
Araha.20560s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold20560: 12844-17843 Arabidopsis halleri
Araha.20560s0005 5.0kb downstream 5.0kb downstream 8869 true Scaffold20560: 3975-12843 Arabidopsis halleri
Araha.20560s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold20560: 3975-8974 Arabidopsis halleri
Araha.20560s0005 10.0kb upstream 10.0kb upstream 13869 true Scaffold20560: 8975-22843 Arabidopsis halleri
Araha.20560s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold20560: 12844-22843 Arabidopsis halleri
Araha.20560s0005 10.0kb downstream 10.0kb downstream 12843 true Scaffold20560: 1-12843 Arabidopsis halleri
Araha.20560s0005 10.0kb downstream 10.0kb downstream 8974 false Scaffold20560: 1-8974 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369003 5261 Brassicaceae View MSA
123835325 5264 Brassicales-Malvales View MSA
124344235 5266 SBM View MSA
124244653 5268 Malvidae View MSA
124062143 5270 Rosid View MSA
123739520 5271 Pentapetalae View MSA
122793543 5272 Eudicot View MSA
122048066 5273 Angiosperm View MSA
121349991 5274 Embryophyte View MSA
123381532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain