Gene : Araha.20819s0001 A. halleri v1.1

Defline:  (1 of 1) K05752 - chromosome 3 open reading frame 10 Genomic Order:  1
Name:  ? Araha.20819s0001 Secondary Identifier:  ? PAC:28861895

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20819s0001 0.5kb upstream 0.5kb upstream 1753 true Scaffold20819: 828-2580 Arabidopsis halleri
Araha.20819s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold20819: 828-1327 Arabidopsis halleri
Araha.20819s0001 0.5kb downstream 0.5kb downstream 1753 true Scaffold20819: 1328-3080 Arabidopsis halleri
Araha.20819s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold20819: 2581-3080 Arabidopsis halleri
Araha.20819s0001 1.0kb upstream 1.0kb upstream 2253 true Scaffold20819: 328-2580 Arabidopsis halleri
Araha.20819s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold20819: 328-1327 Arabidopsis halleri
Araha.20819s0001 1.0kb downstream 1.0kb downstream 2253 true Scaffold20819: 1328-3580 Arabidopsis halleri
Araha.20819s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold20819: 2581-3580 Arabidopsis halleri
Araha.20819s0001 2.0kb upstream 2.0kb upstream 2580 true Scaffold20819: 1-2580 Arabidopsis halleri
Araha.20819s0001 2.0kb upstream 2.0kb upstream 1327 false Scaffold20819: 1-1327 Arabidopsis halleri
Araha.20819s0001 2.0kb downstream 2.0kb downstream 3253 true Scaffold20819: 1328-4580 Arabidopsis halleri
Araha.20819s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold20819: 2581-4580 Arabidopsis halleri
Araha.20819s0001 5.0kb upstream 5.0kb upstream 2580 true Scaffold20819: 1-2580 Arabidopsis halleri
Araha.20819s0001 5.0kb upstream 5.0kb upstream 1327 false Scaffold20819: 1-1327 Arabidopsis halleri
Araha.20819s0001 5.0kb downstream 5.0kb downstream 5526 true Scaffold20819: 1328-6853 Arabidopsis halleri
Araha.20819s0001 5.0kb downstream 5.0kb downstream 4273 false Scaffold20819: 2581-6853 Arabidopsis halleri
Araha.20819s0001 10.0kb upstream 10.0kb upstream 2580 true Scaffold20819: 1-2580 Arabidopsis halleri
Araha.20819s0001 10.0kb upstream 10.0kb upstream 1327 false Scaffold20819: 1-1327 Arabidopsis halleri
Araha.20819s0001 10.0kb downstream 10.0kb downstream 5526 true Scaffold20819: 1328-6853 Arabidopsis halleri
Araha.20819s0001 10.0kb downstream 10.0kb downstream 4273 false Scaffold20819: 2581-6853 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372958 5261 Brassicaceae View MSA
123839904 5264 Brassicales-Malvales View MSA
124341122 5266 SBM View MSA
124247495 5268 Malvidae View MSA
124051100 5270 Rosid View MSA
123747984 5271 Pentapetalae View MSA
122786023 5272 Eudicot View MSA
122047228 5273 Angiosperm View MSA
121347694 5274 Embryophyte View MSA
123380603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain