Gene : Araha.20807s0001 A. halleri v1.1
Defline:  (1 of 3) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  1
Name:  ? Araha.20807s0001 Secondary Identifier:  ? PAC:28842270
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY0-162 Arabidopsis halleri pathologic  
Ahalleri PWY-5686 Arabidopsis halleri pathologic  
Ahalleri PWY-7211 Arabidopsis halleri pathologic  

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20807s0001 0.5kb upstream 0.5kb upstream 2386 true Scaffold20807: 76-2461 Arabidopsis halleri
Araha.20807s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold20807: 76-575 Arabidopsis halleri
Araha.20807s0001 0.5kb downstream 0.5kb downstream 2386 true Scaffold20807: 576-2961 Arabidopsis halleri
Araha.20807s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold20807: 2462-2961 Arabidopsis halleri
Araha.20807s0001 1.0kb upstream 1.0kb upstream 2461 true Scaffold20807: 1-2461 Arabidopsis halleri
Araha.20807s0001 1.0kb upstream 1.0kb upstream 575 false Scaffold20807: 1-575 Arabidopsis halleri
Araha.20807s0001 1.0kb downstream 1.0kb downstream 2886 true Scaffold20807: 576-3461 Arabidopsis halleri
Araha.20807s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold20807: 2462-3461 Arabidopsis halleri
Araha.20807s0001 2.0kb upstream 2.0kb upstream 2461 true Scaffold20807: 1-2461 Arabidopsis halleri
Araha.20807s0001 2.0kb upstream 2.0kb upstream 575 false Scaffold20807: 1-575 Arabidopsis halleri
Araha.20807s0001 2.0kb downstream 2.0kb downstream 3886 true Scaffold20807: 576-4461 Arabidopsis halleri
Araha.20807s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold20807: 2462-4461 Arabidopsis halleri
Araha.20807s0001 5.0kb upstream 5.0kb upstream 2461 true Scaffold20807: 1-2461 Arabidopsis halleri
Araha.20807s0001 5.0kb upstream 5.0kb upstream 575 false Scaffold20807: 1-575 Arabidopsis halleri
Araha.20807s0001 5.0kb downstream 5.0kb downstream 6886 true Scaffold20807: 576-7461 Arabidopsis halleri
Araha.20807s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold20807: 2462-7461 Arabidopsis halleri
Araha.20807s0001 10.0kb upstream 10.0kb upstream 2461 true Scaffold20807: 1-2461 Arabidopsis halleri
Araha.20807s0001 10.0kb upstream 10.0kb upstream 575 false Scaffold20807: 1-575 Arabidopsis halleri
Araha.20807s0001 10.0kb downstream 10.0kb downstream 11886 true Scaffold20807: 576-12461 Arabidopsis halleri
Araha.20807s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold20807: 2462-12461 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361849 5261 Brassicaceae View MSA
123834078 5264 Brassicales-Malvales View MSA
124341674 5266 SBM View MSA
124240648 5268 Malvidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain