Gene : Araha.20633s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR24095:SF178 - ACETATE--COA LIGASE ACS, CHLOROPLASTIC/GLYOXYSOMAL Genomic Order:  2
Name:  ? Araha.20633s0002 Secondary Identifier:  ? PAC:28840895
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY66-21 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.20633s0002 0.5kb upstream 0.5kb upstream 5890 true Scaffold20633: 1945-7834 Arabidopsis halleri
Araha.20633s0002 0.5kb upstream 0.5kb upstream 469 false Scaffold20633: 7366-7834 Arabidopsis halleri
Araha.20633s0002 0.5kb downstream 0.5kb downstream 5921 true Scaffold20633: 1445-7365 Arabidopsis halleri
Araha.20633s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold20633: 1445-1944 Arabidopsis halleri
Araha.20633s0002 1.0kb upstream 1.0kb upstream 5890 true Scaffold20633: 1945-7834 Arabidopsis halleri
Araha.20633s0002 1.0kb upstream 1.0kb upstream 469 false Scaffold20633: 7366-7834 Arabidopsis halleri
Araha.20633s0002 1.0kb downstream 1.0kb downstream 6421 true Scaffold20633: 945-7365 Arabidopsis halleri
Araha.20633s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold20633: 945-1944 Arabidopsis halleri
Araha.20633s0002 2.0kb upstream 2.0kb upstream 5890 true Scaffold20633: 1945-7834 Arabidopsis halleri
Araha.20633s0002 2.0kb upstream 2.0kb upstream 469 false Scaffold20633: 7366-7834 Arabidopsis halleri
Araha.20633s0002 2.0kb downstream 2.0kb downstream 7365 true Scaffold20633: 1-7365 Arabidopsis halleri
Araha.20633s0002 2.0kb downstream 2.0kb downstream 1944 false Scaffold20633: 1-1944 Arabidopsis halleri
Araha.20633s0002 5.0kb upstream 5.0kb upstream 5890 true Scaffold20633: 1945-7834 Arabidopsis halleri
Araha.20633s0002 5.0kb upstream 5.0kb upstream 469 false Scaffold20633: 7366-7834 Arabidopsis halleri
Araha.20633s0002 5.0kb downstream 5.0kb downstream 7365 true Scaffold20633: 1-7365 Arabidopsis halleri
Araha.20633s0002 5.0kb downstream 5.0kb downstream 1944 false Scaffold20633: 1-1944 Arabidopsis halleri
Araha.20633s0002 10.0kb upstream 10.0kb upstream 5890 true Scaffold20633: 1945-7834 Arabidopsis halleri
Araha.20633s0002 10.0kb upstream 10.0kb upstream 469 false Scaffold20633: 7366-7834 Arabidopsis halleri
Araha.20633s0002 10.0kb downstream 10.0kb downstream 7365 true Scaffold20633: 1-7365 Arabidopsis halleri
Araha.20633s0002 10.0kb downstream 10.0kb downstream 1944 false Scaffold20633: 1-1944 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375220 5261 Brassicaceae View MSA
123831585 5264 Brassicales-Malvales View MSA
124346209 5266 SBM View MSA
124241658 5268 Malvidae View MSA
124065659 5270 Rosid View MSA
123746880 5271 Pentapetalae View MSA
122789146 5272 Eudicot View MSA
122041906 5273 Angiosperm View MSA
121351540 5274 Embryophyte View MSA
123424340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain