Gene : Araha.21552s0005 A. halleri v1.1
Defline:  (1 of 3) PTHR10336:SF92 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 2-RELATED Genomic Order:  5
Name:  ? Araha.21552s0005 Secondary Identifier:  ? PAC:28844019
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri LIPASYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-6351 Arabidopsis halleri pathologic  
Ahalleri PWY-6367 Arabidopsis halleri pathologic  
Ahalleri PWY-7039 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.21552s0005 0.5kb upstream 0.5kb upstream 3797 true Scaffold21552: 17438-21234 Arabidopsis halleri
Araha.21552s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold21552: 20735-21234 Arabidopsis halleri
Araha.21552s0005 0.5kb downstream 0.5kb downstream 3797 true Scaffold21552: 16938-20734 Arabidopsis halleri
Araha.21552s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold21552: 16938-17437 Arabidopsis halleri
Araha.21552s0005 1.0kb upstream 1.0kb upstream 4146 true Scaffold21552: 17438-21583 Arabidopsis halleri
Araha.21552s0005 1.0kb upstream 1.0kb upstream 849 false Scaffold21552: 20735-21583 Arabidopsis halleri
Araha.21552s0005 1.0kb downstream 1.0kb downstream 4297 true Scaffold21552: 16438-20734 Arabidopsis halleri
Araha.21552s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold21552: 16438-17437 Arabidopsis halleri
Araha.21552s0005 2.0kb upstream 2.0kb upstream 4146 true Scaffold21552: 17438-21583 Arabidopsis halleri
Araha.21552s0005 2.0kb upstream 2.0kb upstream 849 false Scaffold21552: 20735-21583 Arabidopsis halleri
Araha.21552s0005 2.0kb downstream 2.0kb downstream 5297 true Scaffold21552: 15438-20734 Arabidopsis halleri
Araha.21552s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold21552: 15438-17437 Arabidopsis halleri
Araha.21552s0005 5.0kb upstream 5.0kb upstream 4146 true Scaffold21552: 17438-21583 Arabidopsis halleri
Araha.21552s0005 5.0kb upstream 5.0kb upstream 849 false Scaffold21552: 20735-21583 Arabidopsis halleri
Araha.21552s0005 5.0kb downstream 5.0kb downstream 8297 true Scaffold21552: 12438-20734 Arabidopsis halleri
Araha.21552s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold21552: 12438-17437 Arabidopsis halleri
Araha.21552s0005 10.0kb upstream 10.0kb upstream 4146 true Scaffold21552: 17438-21583 Arabidopsis halleri
Araha.21552s0005 10.0kb upstream 10.0kb upstream 849 false Scaffold21552: 20735-21583 Arabidopsis halleri
Araha.21552s0005 10.0kb downstream 10.0kb downstream 13297 true Scaffold21552: 7438-20734 Arabidopsis halleri
Araha.21552s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold21552: 7438-17437 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372205 5261 Brassicaceae View MSA
123828269 5264 Brassicales-Malvales View MSA
124338604 5266 SBM View MSA
124251870 5268 Malvidae View MSA
124071120 5270 Rosid View MSA
123747360 5271 Pentapetalae View MSA
122796639 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain