Gene : Araha.21552s0002 A. halleri v1.1
Defline:  (1 of 2) PTHR10336:SF105 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 1-RELATED Genomic Order:  2
Name:  ? Araha.21552s0002 Secondary Identifier:  ? PAC:28844018
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri LIPASYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-6351 Arabidopsis halleri pathologic  
Ahalleri PWY-6367 Arabidopsis halleri pathologic  
Ahalleri PWY-7039 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.21552s0002 0.5kb upstream 0.5kb upstream 3056 true Scaffold21552: 8578-11633 Arabidopsis halleri
Araha.21552s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold21552: 11134-11633 Arabidopsis halleri
Araha.21552s0002 0.5kb downstream 0.5kb downstream 3056 true Scaffold21552: 8078-11133 Arabidopsis halleri
Araha.21552s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold21552: 8078-8577 Arabidopsis halleri
Araha.21552s0002 1.0kb upstream 1.0kb upstream 3556 true Scaffold21552: 8578-12133 Arabidopsis halleri
Araha.21552s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold21552: 11134-12133 Arabidopsis halleri
Araha.21552s0002 1.0kb downstream 1.0kb downstream 3556 true Scaffold21552: 7578-11133 Arabidopsis halleri
Araha.21552s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold21552: 7578-8577 Arabidopsis halleri
Araha.21552s0002 2.0kb upstream 2.0kb upstream 4556 true Scaffold21552: 8578-13133 Arabidopsis halleri
Araha.21552s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold21552: 11134-13133 Arabidopsis halleri
Araha.21552s0002 2.0kb downstream 2.0kb downstream 4556 true Scaffold21552: 6578-11133 Arabidopsis halleri
Araha.21552s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold21552: 6578-8577 Arabidopsis halleri
Araha.21552s0002 5.0kb upstream 5.0kb upstream 7556 true Scaffold21552: 8578-16133 Arabidopsis halleri
Araha.21552s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold21552: 11134-16133 Arabidopsis halleri
Araha.21552s0002 5.0kb downstream 5.0kb downstream 7556 true Scaffold21552: 3578-11133 Arabidopsis halleri
Araha.21552s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold21552: 3578-8577 Arabidopsis halleri
Araha.21552s0002 10.0kb upstream 10.0kb upstream 12556 true Scaffold21552: 8578-21133 Arabidopsis halleri
Araha.21552s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold21552: 11134-21133 Arabidopsis halleri
Araha.21552s0002 10.0kb downstream 10.0kb downstream 11133 true Scaffold21552: 1-11133 Arabidopsis halleri
Araha.21552s0002 10.0kb downstream 10.0kb downstream 8577 false Scaffold21552: 1-8577 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792751 5273 Angiosperm View MSA
122363671 5261 Brassicaceae View MSA
123835574 5264 Brassicales-Malvales View MSA
124349401 5266 SBM View MSA
124246410 5268 Malvidae View MSA
124071681 5270 Rosid View MSA
123628037 5271 Pentapetalae View MSA
122798488 5272 Eudicot View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain